MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3136 · 41 genes shown · anchor PPE50 · open gene page → · ← back to 1 hop

Evidence: Min score 0
PPE51 (family_assigned) — PPE family protein PPE51 PPE51 PPE50 (family_assigned) — PPE family protein PPE50 PPE50 hisN (requalified) — histidinol-phosphatase hisN Rv1747 (family_assigned) — ATP-binding cassette domain-containing protein Rv1747 ephD (family_assigned) — SDR family oxidoreductase ephD cinA (requalified) — competence/damage-inducible protein A cinA PE_PGRS20 (family_assigned) — PE-PGRS family protein PE_PGRS20 PE_PGRS20 rpsI (requalified) — 30S ribosomal protein S9 rpsI glpK (requalified) — glycerol kinase GlpK glpK rpsF (requalified) — 30S ribosomal protein S6 rpsF serS (requalified) — serine--tRNA ligase serS hisD (requalified) — histidinol dehydrogenase hisD hisC1 (requalified) — histidinol-phosphate aminotransferase hisC1 cobC (requalified) — aminotransferase cobC hisC2 (requalified) — histidinol-phosphate transaminase hisC2 pflA (requalified) — AmmeMemoRadiSam system radical SAM enzyme pflA Rv3136A (dark) — hypothetical protein Rv3136A Rv1248c (family_assigned) — multifunctional oxoglutarate decarboxylase/oxoglut Rv1248c pknB (family_assigned) — Stk1 family PASTA domain-containing Ser/Thr kinase pknB pknF (requalified) — serine/threonine protein kinase PknF pknF Rv1364c (family_assigned) — sigma factor regulatory protein Rv1364c Rv1278 (family_assigned) — AAA family ATPase Rv1278 Rv1277 (family_assigned) — hypothetical protein Rv1277 pks12 (requalified) — type I polyketide synthase pks12 mas (requalified) — mycocerosate synthase mas pks2 (requalified) — phthioceranic/hydroxyphthioceranic acid synthase pks2 ppsC (requalified) — phthiocerol type I polyketide synthase PpsC ppsC pks5 (requalified) — sulfolipid-1 biosynthesis phthioceranic/hydroxypht pks5 Rv3549c (family_assigned) — SDR family oxidoreductase Rv3549c nadD (requalified) — nicotinate-nucleotide adenylyltransferase nadD pncB1 (requalified) — nicotinate phosphoribosyltransferase pncB1 pncB2 (requalified) — nicotinate phosphoribosyltransferase pncB2 nadR (requalified) — nicotinamide-nucleotide adenylyltransferase nadR nadC (requalified) — carboxylating nicotinate-nucleotide diphosphorylas nadC nudC (requalified) — NAD(+) diphosphatase nudC zmp1 (requalified) — zinc metalloprotease Zmp1 zmp1 rpfD (requalified) — resuscitation-promoting factor protein RpfD rpfD rpfA (requalified) — resuscitation-promoting factor protein RpfA rpfA gap (requalified) — type I glyceraldehyde-3-phosphate dehydrogenase gap vapC12 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC12 vapC8 (family_assigned) — PIN domain-containing protein vapC8

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.