MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3129 · 45 genes shown · anchor papA3 · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3129 (family_assigned) — Conserved hypothetical protein Rv3129 mdh (requalified) — malate dehydrogenase mdh papA3 (requalified) — acyltransferase PapA3 papA3 Rv3127 (requalified) — NAD(P)H nitroreductase Rv3127 papA2 (requalified) — trehalose-2-sulfate acyltransferase papA2 papA1 (requalified) — acyltransferase PapA1 papA1 Rv2714 (family_assigned) — PAC2 family protein Rv2714 Rv0295c (family_assigned) — Stf0 family sulfotransferase Rv0295c Rv1734c (family_assigned) — hypothetical protein Rv1734c Rv2125 (family_assigned) — PAC2 family protein Rv2125 Rv1619 (requalified) — bifunctional lysylphosphatidylglycerol flippase/sy Rv1619 Rv0080 (family_assigned) — pyridoxamine 5'-phosphate oxidase family protein Rv0080 citA (requalified) — citrate synthase 2 citA gltA2 (requalified) — citrate synthase gltA2 prpC (requalified) — 2-methylcitrate synthase prpC fum (requalified) — class II fumarate hydratase fum mez (requalified) — NAD-dependent malic enzyme mez pca (requalified) — pyruvate carboxylase pca pks4 (requalified) — polyketide beta-ketoacyl synthase pks4 mmpL10 (requalified) — RND transporter MmpL10 mmpL10 pks3 (requalified) — polyketide beta-ketoacyl synthase pks3 pks2 (requalified) — phthioceranic/hydroxyphthioceranic acid synthase pks2 pks5 (requalified) — sulfolipid-1 biosynthesis phthioceranic/hydroxypht pks5 mas (requalified) — mycocerosate synthase mas Rv1738 (family_assigned) — DUF1876 domain-containing protein Rv1738 Rv1996 (requalified) — universal stress protein Rv1996 Rv3134c (requalified) — universal stress protein Rv3134c Rv3131 (requalified) — NAD(P)H nitroreductase Rv3131 tgs1 (requalified) — diacylglycerol O-acyltransferase tgs1 ppsC (requalified) — phthiocerol type I polyketide synthase PpsC ppsC pks12 (requalified) — type I polyketide synthase pks12 pks13 (requalified) — polyketide synthase Pks13 pks13 mmpL8 (requalified) — sulfolipid-1 RND transporter MmpL8 mmpL8 Rv2715 (family_assigned) — alpha/beta hydrolase Rv2715 Rv2716 (family_assigned) — PhzF family phenazine biosynthesis protein Rv2716 sthA (requalified) — Si-specific NAD(P)(+) transhydrogenase sthA whiB2 (family_assigned) — transcriptional regulator WhiB2 whiB2 whiB1 (family_assigned) — transcriptional regulator WhiB1 whiB1 Rv0296c (requalified) — sulfatase Rv0296c lprB (family_assigned) — DUF3558 domain-containing protein lprB Rv0210 (family_assigned) — hypothetical protein Rv0210 Rv0180c (family_assigned) — YhgE/Pip domain-containing protein Rv0180c bkdB (family_assigned) — 3-methyl-2-oxobutanoate dehydrogenase subunit beta bkdB Rv1248c (family_assigned) — multifunctional oxoglutarate decarboxylase/oxoglut Rv1248c Rv0843 (family_assigned) — thiamine pyrophosphate-dependent dehydrogenase E1 Rv0843

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.