MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3106 · 46 genes shown · anchor gltB · open gene page → · ← back to 1 hop

Evidence: Min score 0
fprA (requalified) — ferredoxin--NADP(+) reductase FprA fprA gltB (family_assigned) — glutamate synthase large subunit gltB Rv1937 (requalified) — FAD-binding oxidoreductase Rv1937 fprB (requalified) — FAD-dependent oxidoreductase fprB sirA (requalified) — sulfite reductase sirA cysH (requalified) — phosphoadenylyl-sulfate reductase cysH metC (requalified) — bifunctional o-acetylhomoserine/o-acetylserine sul metC prfB (requalified) — peptide chain release factor PrfB prfB Rv3104c (family_assigned) — mechanosensitive ion channel family protein Rv3104c fdxB (requalified) — fatty acid desaturase fdxB kshB (family_assigned) — 3-ketosteroid-9-alpha-hydroxylase reductase subuni kshB Rv2776c (requalified) — oxidoreductase Rv2776c Rv3230c (requalified) — NADPH oxidoreductase Rv3230c gltD (family_assigned) — glutamate synthase subunit beta gltD fadH (requalified) — NADPH-dependent 2%2C4-dienoyl-CoA reductase fadH carB (family_assigned) — carbamoyl-phosphate synthase large subunit carB glnA1 (requalified) — type I glutamate--ammonia ligase glnA1 ephB (requalified) — epoxide hydrolase EphB ephB ribA1 (requalified) — riboflavin biosynthesis protein RibA ribA1 Rv0885 (requalified) — diiron oxygenase Rv0885 Rv2455c (family_assigned) — 2-oxoacid:acceptor oxidoreductase subunit alpha Rv2455c cysC (requalified) — adenylyl-sulfate kinase cysC che1 (requalified) — ferrochelatase che1 cysK1 (requalified) — O-acetylserine sulfhydrylase cysK1 Rv3684 (requalified) — lyase Rv3684 metB (requalified) — cystathionine gamma-synthase metB ggtB (family_assigned) — gamma-glutamyltransferase family protein ggtB cysQ (requalified) — 3'(2')%2C5'-bisphosphate nucleotidase CysQ cysQ cysA2 (requalified) — sulfurtransferase cysA2 metA (requalified) — homoserine O-acetyltransferase metA metH (requalified) — methionine synthase metH metZ (requalified) — O-succinylhomoserine sulfhydrylase metZ Rv3342 (requalified) — class I SAM-dependent methyltransferase Rv3342 metE (requalified) — 5-methyltetrahydropteroyltriglutamate--homocystein metE rplU (requalified) — 50S ribosomal protein L21 rplU rpmA (requalified) — 50S ribosomal protein L27 rpmA rplL (requalified) — 50S ribosomal protein L7/L12 rplL rplP (requalified) — 50S ribosomal protein L16 rplP rplM (requalified) — 50S ribosomal protein L13 rplM rpsP (requalified) — 30S ribosomal protein S16 rpsP Rv3103c (dark) — hypothetical protein Rv3103c ftsE (family_assigned) — cell division ATP-binding protein FtsE ftsE ftsX (requalified) — permease-like cell division protein FtsX ftsX smpB (family_assigned) — SsrA-binding protein SmpB smpB Rv1465 (family_assigned) — SUF system NifU family Fe-S cluster assembly prote Rv1465 iscS (family_assigned) — cysteine desulfurase family protein iscS

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.