MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3075c · 46 genes shown · anchor hab · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3075c (requalified) — CoA ester lyase Rv3075c citE (family_assigned) — citrate (pro-3S)-lyase subunit beta citE fucA (requalified) — L-fuculose-phosphate aldolase fucA Rv3076 (family_assigned) — SRPBCC family protein Rv3076 hab (requalified) — hydrogenase hab Rv2286c (family_assigned) — DsbA family protein Rv2286c Rv3073c (dark) — DUF488 domain-containing protein Rv3073c Rv3077 (requalified) — hydrolase Rv3077 Rv2499c (family_assigned) — MaoC family dehydratase Rv2499c sdhA (family_assigned) — succinate dehydrogenase flavoprotein subunit sdhA mez (requalified) — NAD-dependent malic enzyme mez dapA (requalified) — 4-hydroxy-tetrahydrodipicolinate synthase dapA mutB (requalified) — methylmalonyl-CoA mutase mutB accA1 (family_assigned) — acetyl/propionyl/methylcrotonyl-CoA carboxylase su accA1 fadE19 (family_assigned) — acyl-CoA dehydrogenase family protein fadE19 accD1 (family_assigned) — acetyl-/propionyl-CoA carboxylase subunit beta accD1 scoB (family_assigned) — succinyl-CoA--3-ketoacid CoA transferase subunit B scoB serA2 (requalified) — D-3-phosphoglycerate dehydrogenase SerA serA2 tpi (requalified) — triose-phosphate isomerase tpi xylB (requalified) — FGGY-family carbohydrate kinase xylB fba (requalified) — class II fructose-bisphosphate aldolase fba Rv2326c (family_assigned) — ABC transporter ATP-binding protein Rv2326c Rv2325c (family_assigned) — CbiQ family ECF transporter T component Rv2325c nicT (family_assigned) — HoxN/HupN/NixA family nickel/cobalt transporter nicT mca (requalified) — mycothiol conjugate amidase Mca mca mshD (requalified) — mycothiol synthase mshD yjcE (requalified) — Na(+)/H(+) transporter yjcE cdh (requalified) — CDP-diacylglycerol diphosphatase cdh Rv2288 (dark) — hypothetical protein Rv2288 Rv3072c (family_assigned) — hypothetical protein Rv3072c udgB (requalified) — uracil DNA glycosylase udgB Rv3074 (family_assigned) — DUF222 domain-containing protein Rv3074 mbtK (requalified) — lysine N-acyltransferase MbtK mbtK smpB (family_assigned) — SsrA-binding protein SmpB smpB Rv0712 (family_assigned) — formylglycine-generating enzyme family protein Rv0712 iniA (requalified) — isoniazid inductible protein IniA iniA glgC (requalified) — glucose-1-phosphate adenylyltransferase glgC cpnT (requalified) — outer membrane channel protein/necrotizing toxin g cpnT scoA (family_assigned) — succinyl-CoA--3-ketoacid CoA transferase subunit A scoA sdhB (family_assigned) — succinate dehydrogenase iron-sulfur subunit sdhB sdhC (family_assigned) — succinate dehydrogenase%2C cytochrome b556 subunit sdhC sdhD (family_assigned) — succinate dehydrogenase hydrophobic membrane ancho sdhD frdB (family_assigned) — succinate dehydrogenase iron-sulfur subunit frdB Rv0247c (family_assigned) — succinate dehydrogenase/fumarate reductase iron-su Rv0247c fum (requalified) — class II fumarate hydratase fum mdh (requalified) — malate dehydrogenase mdh

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.