MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3066 · 46 genes shown · anchor mmr · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3066 (family_assigned) — TetR/AcrR family transcriptional regulator Rv3066 mmr (requalified) — multidrug resistance protein Mmr mmr Rv3183 (family_assigned) — XRE family transcriptional regulator Rv3183 sirR (family_assigned) — manganese-binding transcriptional regulator MntR sirR Rv1725c (family_assigned) — winged helix-turn-helix transcriptional regulator Rv1725c mftR (family_assigned) — mycofactocin system transcriptional regulator mftR Rv1167c (family_assigned) — TetR/AcrR family transcriptional regulator Rv1167c Rv1674c (family_assigned) — metalloregulator ArsR/SmtB family transcription fa Rv1674c cobB (requalified) — NAD-dependent protein deacylase cobB Rv3736 (family_assigned) — AraC family transcriptional regulator Rv3736 Rv0494 (family_assigned) — HTH-type transcriptional regulator Rv0494 Rv3167c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3167c embR (requalified) — response regulator transcription factor EmbR embR Rv3064c (family_assigned) — DoxX family protein Rv3064c Rv3067 (family_assigned) — hypothetical protein Rv3067 guaA (requalified) — glutamine-hydrolyzing GMP synthase guaA Rv1217c (family_assigned) — multidrug efflux ABC transporter permease Rv1217c Rv3728 (requalified) — MFS transporter Rv3728 Rv3182 (family_assigned) — type II toxin-antitoxin system RelE/ParE family to Rv3182 Rv3263 (requalified) — class I SAM-dependent methyltransferase Rv3263 Rv3840 (family_assigned) — transcriptional regulator Rv3840 Rv1776c (family_assigned) — TetR/AcrR family transcriptional regulator Rv1776c sigJ (family_assigned) — sigma-70 family RNA polymerase sigma factor SigJ sigJ Rv2488c (family_assigned) — LuxR family transcriptional regulator Rv2488c Rv1019 (family_assigned) — TetR/AcrR family transcriptional regulator Rv1019 Rv0273c (family_assigned) — TetR/AcrR family transcriptional regulator Rv0273c Rv1931c (family_assigned) — transcriptional regulator Rv1931c Rv1724c (dark) — hypothetical protein Rv1724c sigI (requalified) — RNA polymerase sigma factor SigI sigI Rv3055 (family_assigned) — helix-turn-helix domain-containing protein Rv3055 Rv3830c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3830c mftB (requalified) — mycofactocin biosynthesis chaperone MftB mftB mftC (requalified) — mycofactocin radical SAM maturase mftC Rv0690c (family_assigned) — DUF2332 domain-containing protein Rv0690c Rv1556 (family_assigned) — TetR/AcrR family transcriptional regulator Rv1556 Rv0653c (family_assigned) — TetR/AcrR family transcriptional regulator Rv0653c cmr (family_assigned) — HTH-type transcriptional regulator Cmr cmr nadR (requalified) — nicotinamide-nucleotide adenylyltransferase nadR nadE (requalified) — NAD(+) synthase nadE Rv1152 (family_assigned) — GntR family transcriptional regulator Rv1152 pncA (requalified) — pyrazinamidase PncA pncA nadD (requalified) — nicotinate-nucleotide adenylyltransferase nadD sthA (requalified) — Si-specific NAD(P)(+) transhydrogenase sthA Rv1985c (family_assigned) — ArgP/LysG family DNA-binding transcriptional regul Rv1985c Rv1773c (family_assigned) — IclR family transcriptional regulator Rv1773c Rv0792c (family_assigned) — GntR family transcriptional regulator Rv0792c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.