MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3061c · 46 genes shown · anchor ligB · open gene page → · ← back to 1 hop

Evidence: Min score 0
fadE22 (requalified) — acyl-CoA dehydrogenase fadE22 fadB (requalified) — fatty oxidation protein FadB fadB ligB (requalified) — ATP-dependent DNA ligase ligB Rv3060c (family_assigned) — FCD domain-containing protein Rv3060c fixA (family_assigned) — electron transfer flavoprotein subunit beta/FixA f fixA chsH1 (family_assigned) — 3-oxo-23%2C24-bisnorchol-4%2C17(20)-dien-22-oyl-Co chsH1 fixB (family_assigned) — electron transfer flavoprotein subunit alpha/FixB fixB echA20 (family_assigned) — enoyl-CoA hydratase family protein echA20 Rv0310c (family_assigned) — nuclear transport factor 2 family protein Rv0310c ltp3 (family_assigned) — thiolase domain-containing protein ltp3 echA13 (requalified) — enoyl-CoA hydratase echA13 ltp4 (family_assigned) — thiolase domain-containing protein ltp4 nuoI (family_assigned) — NADH-quinone oxidoreductase subunit NuoI nuoI fadA (requalified) — acetyl-CoA C-acetyltransferase fadA fadA2 (requalified) — acetyl-CoA C-acetyltransferase fadA2 fadA4 (requalified) — acetyl-CoA acetyltransferase fadA4 fadA6 (requalified) — acetyl-CoA C-acetyltransferase fadA6 Rv1867 (requalified) — acetyl-CoA acetyltransferase Rv1867 ligA (requalified) — NAD-dependent DNA ligase LigA ligA lppK (family_assigned) — hypothetical protein lppK dnaN (family_assigned) — DNA polymerase III subunit beta dnaN polA (requalified) — DNA polymerase I polA Rv2090 (requalified) — 5'-3' exonuclease Rv2090 ethR (family_assigned) — HTH-type transcriptional regulator EthR ethR Rv3183 (family_assigned) — XRE family transcriptional regulator Rv3183 Rv3263 (requalified) — class I SAM-dependent methyltransferase Rv3263 Rv0792c (family_assigned) — GntR family transcriptional regulator Rv0792c mftR (family_assigned) — mycofactocin system transcriptional regulator mftR Rv3055 (family_assigned) — helix-turn-helix domain-containing protein Rv3055 fadH (requalified) — NADPH-dependent 2%2C4-dienoyl-CoA reductase fadH fadE19 (family_assigned) — acyl-CoA dehydrogenase family protein fadE19 fadE25 (requalified) — acyl-CoA dehydrogenase fadE25 fadE13 (family_assigned) — acyl-CoA dehydrogenase family protein fadE13 fadE21 (family_assigned) — acyl-CoA dehydrogenase family protein fadE21 chsH2 (family_assigned) — 3-oxo-23%2C24-bisnorchol-4%2C17(20)-dien-22-oyl-Co chsH2 ltp2 (requalified) — lipid-transfer protein ltp2 fadE29 (requalified) — acyl-CoA dehydrogenase FadE29 fadE29 fadE28 (requalified) — acyl-CoA dehydrogenase FadE28 fadE28 cyp125 (requalified) — steroid C26-monooxygenase cyp125 fadA5 (requalified) — steroid 3-ketoacyl-CoA thiolase fadA5 fadE20 (family_assigned) — acyl-CoA dehydrogenase family protein fadE20 Rv3551 (family_assigned) — CoA transferase subunit A Rv3551 Rv3552 (family_assigned) — CoA-transferase subunit beta Rv3552 Rv3549c (family_assigned) — SDR family oxidoreductase Rv3549c Rv3553 (requalified) — nitronate monooxygenase Rv3553 Rv3548c (family_assigned) — SDR family oxidoreductase Rv3548c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.