MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3060c · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3060c (family_assigned) — FCD domain-containing protein Rv3060c ethR (family_assigned) — HTH-type transcriptional regulator EthR ethR Rv3183 (family_assigned) — XRE family transcriptional regulator Rv3183 Rv3263 (requalified) — class I SAM-dependent methyltransferase Rv3263 Rv0792c (family_assigned) — GntR family transcriptional regulator Rv0792c mftR (family_assigned) — mycofactocin system transcriptional regulator mftR Rv3055 (family_assigned) — helix-turn-helix domain-containing protein Rv3055 Rv3830c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3830c Rv0273c (family_assigned) — TetR/AcrR family transcriptional regulator Rv0273c Rv1019 (family_assigned) — TetR/AcrR family transcriptional regulator Rv1019 Rv1725c (family_assigned) — winged helix-turn-helix transcriptional regulator Rv1725c Rv1985c (family_assigned) — ArgP/LysG family DNA-binding transcriptional regul Rv1985c Rv1167c (family_assigned) — TetR/AcrR family transcriptional regulator Rv1167c Rv0158 (family_assigned) — TetR/AcrR family transcriptional regulator Rv0158 vapC30 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC30 Rv3182 (family_assigned) — type II toxin-antitoxin system RelE/ParE family to Rv3182 Rv3066 (family_assigned) — TetR/AcrR family transcriptional regulator Rv3066 Rv3840 (family_assigned) — transcriptional regulator Rv3840 Rv1776c (family_assigned) — TetR/AcrR family transcriptional regulator Rv1776c iniR (family_assigned) — isoniazid response ATPase/transcriptional regulato iniR Rv1359 (family_assigned) — transcriptional regulator Rv1359 embR (requalified) — response regulator transcription factor EmbR embR Rv3736 (family_assigned) — AraC family transcriptional regulator Rv3736 Rv0790c (family_assigned) — transglutaminase-like domain-containing protein Rv0790c Rv0791c (requalified) — LLM class flavin-dependent oxidoreductase Rv0791c Rv0494 (family_assigned) — HTH-type transcriptional regulator Rv0494 Rv3833 (family_assigned) — helix-turn-helix transcriptional regulator Rv3833 mftB (requalified) — mycofactocin biosynthesis chaperone MftB mftB mftC (requalified) — mycofactocin radical SAM maturase mftC Rv0690c (family_assigned) — DUF2332 domain-containing protein Rv0690c Rv3167c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3167c moaR1 (family_assigned) — transcriptional regulator MoaR1 moaR1 dinP (requalified) — DNA polymerase IV dinP Rv0737 (family_assigned) — MarR family transcriptional regulator Rv0737 Rv3829c (requalified) — NAD(P)/FAD-dependent oxidoreductase Rv3829c Rv1556 (family_assigned) — TetR/AcrR family transcriptional regulator Rv1556 Rv0272c (family_assigned) — alpha/beta hydrolase Rv0272c Rv0274 (family_assigned) — VOC family protein Rv0274 Rv0674 (family_assigned) — PaaX family transcriptional regulator C-terminal d Rv0674 trcR (requalified) — two-component system response regulator TrcR trcR moxR3 (family_assigned) — MoxR family ATPase moxR3 Rv1152 (family_assigned) — GntR family transcriptional regulator Rv1152 Rv0038 (family_assigned) — YqgE/AlgH family protein Rv0038 Rv0653c (family_assigned) — TetR/AcrR family transcriptional regulator Rv0653c sirR (family_assigned) — manganese-binding transcriptional regulator MntR sirR Rv1931c (family_assigned) — transcriptional regulator Rv1931c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.