MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3050c · 46 genes shown · anchor nrdI · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3050c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3050c nrdI (requalified) — class Ib ribonucleoside-diphosphate reductase asse nrdI nrdE (family_assigned) — ribonucleoside-diphosphate reductase subunit alpha nrdE Rv3049c (requalified) — NAD(P)/FAD-dependent oxidoreductase Rv3049c nrdH (requalified) — redoxin NrdH nrdH nrdF2 (family_assigned) — ribonucleoside-diphosphate reductase subunit beta nrdF2 Rv0250c (family_assigned) — hypothetical protein Rv0250c htdX (requalified) — 3-hydroxyacyl-thioester dehydratase HtdX htdX Rv0476 (requalified) — transmembrane protein Rv0476 fabG4 (requalified) — 3-oxoacyl-ACP reductase fabG4 lppL (family_assigned) — hypothetical protein lppL Rv2743c (family_assigned) — hypothetical protein Rv2743c fadA2 (requalified) — acetyl-CoA C-acetyltransferase fadA2 nrdF1 (family_assigned) — ribonucleoside-diphosphate reductase subunit beta nrdF1 nrdB (requalified) — R2-like ligand-binding oxidase nrdB Rv0038 (family_assigned) — YqgE/AlgH family protein Rv0038 Rv1245c (family_assigned) — SDR family NAD(P)-dependent oxidoreductase Rv1245c Rv3085 (family_assigned) — SDR family NAD(P)-dependent oxidoreductase Rv3085 Rv3741c (requalified) — oxidoreductase Rv3741c nrdZ (requalified) — adenosylcobalamin-dependent ribonucleoside-diphosp nrdZ Rv3047c (dark) — hypothetical protein Rv3047c tmk (requalified) — dTMP kinase tmk Rv0249c (family_assigned) — succinate dehydrogenase membrane anchor subunit Rv0249c Rv0248c (family_assigned) — fumarate reductase/succinate dehydrogenase flavopr Rv0248c Rv0247c (family_assigned) — succinate dehydrogenase/fumarate reductase iron-su Rv0247c Rv0431 (requalified) — tuberculin-like peptide Rv0431 Rv3415c (family_assigned) — hypothetical protein Rv3415c fadB (requalified) — fatty oxidation protein FadB fadB fadE23 (family_assigned) — acyl-CoA dehydrogenase family protein fadE23 fadE24 (family_assigned) — acyl-CoA dehydrogenase family protein fadE24 fadE8 (family_assigned) — acyl-CoA dehydrogenase family protein fadE8 deoC (requalified) — deoxyribose-phosphate aldolase deoC Rv0477 (dark) — DUF2599 domain-containing protein Rv0477 hbhA (requalified) — heparin-binding hemagglutinin HbhA hbhA Rv0474 (family_assigned) — helix-turn-helix transcriptional regulator Rv0474 Rv0473 (dark) — DUF445 domain-containing protein Rv0473 Rv0472c (family_assigned) — TetR/AcrR family transcriptional regulator Rv0472c fas (requalified) — fatty acid synthase fas fabD (requalified) — malonyl CoA-acyl carrier protein transacylase fabD htdY (requalified) — 3-hydroxyacyl-thioester dehydratase HtdY htdY Rv3538 (requalified) — dehydrogenase Rv3538 Rv3212 (family_assigned) — hypothetical protein Rv3212 Rv0556 (family_assigned) — DUF3592 domain-containing protein Rv0556 Rv1081c (dark) — DUF4307 domain-containing protein Rv1081c Rv0996 (family_assigned) — hypothetical protein Rv0996 35kd_ag (family_assigned) — hypothetical protein 35kd_ag

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.