MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3047c · 45 genes shown · anchor nrdF2 · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3047c (dark) — hypothetical protein Rv3047c nrdF2 (family_assigned) — ribonucleoside-diphosphate reductase subunit beta nrdF2 Rv3046c (family_assigned) — DUF3349 domain-containing protein Rv3046c recX (requalified) — recombination regulator RecX recX Rv2898c (family_assigned) — YraN family protein Rv2898c Rv1706A (dark) — hypothetical protein Rv1706A PPE23 (family_assigned) — PPE family protein PPE23 PPE23 Rv2325c (family_assigned) — CbiQ family ECF transporter T component Rv2325c ftsE (family_assigned) — cell division ATP-binding protein FtsE ftsE Rv1382 (requalified) — transporter Rv1382 nrdE (family_assigned) — ribonucleoside-diphosphate reductase subunit alpha nrdE nrdZ (requalified) — adenosylcobalamin-dependent ribonucleoside-diphosp nrdZ nrdI (requalified) — class Ib ribonucleoside-diphosphate reductase asse nrdI nrdF1 (family_assigned) — ribonucleoside-diphosphate reductase subunit beta nrdF1 tmk (requalified) — dTMP kinase tmk Rv3256c (requalified) — TobH protein Rv3256c Rv0184 (dark) — DUF2786 domain-containing protein Rv0184 Rv0185 (family_assigned) — TIGR04338 family metallohydrolase Rv0185 Rv3847 (requalified) — peptidase Rv3847 papA3 (requalified) — acyltransferase PapA3 papA3 recA (requalified) — intein-containing recombinase RecA recA radA (requalified) — DNA repair protein RadA radA Rv2735c (requalified) — three-Cys-motif partner protein TcmP Rv2735c ruvC (requalified) — crossover junction endodeoxyribonuclease RuvC ruvC thiL (requalified) — thiamine-phosphate kinase thiL Rv2897c (family_assigned) — YifB family Mg chelatase-like AAA ATPase Rv2897c dprA (requalified) — DNA-processing protein DprA dprA viuB (requalified) — siderophore-interacting protein viuB fdhD (requalified) — formate dehydrogenase accessory sulfurtransferase fdhD Rv1364c (family_assigned) — sigma factor regulatory protein Rv1364c Rv1354c (requalified) — bifunctional diguanylate cyclase/phosphodiesterase Rv1354c Rv1707 (family_assigned) — SulP family inorganic anion transporter Rv1707 scpB (family_assigned) — SMC-Scp complex subunit ScpB scpB Rv1708 (requalified) — initiation inhibitor protein Rv1708 engA (requalified) — ribosome biogenesis GTPase Der engA cmk (requalified) — (d)CMP kinase cmk scpA (requalified) — segregation/condensation protein A scpA PPE22 (family_assigned) — PPE family protein PPE22 PPE22 cycA (requalified) — amino acid permease cycA Rv1703c (requalified) — O-methyltransferase Rv1703c Rv3095 (family_assigned) — helix-turn-helix domain-containing protein Rv3095 adhA (family_assigned) — zinc-binding alcohol dehydrogenase family protein adhA Rv2326c (family_assigned) — ABC transporter ATP-binding protein Rv2326c Rv2327 (family_assigned) — MarR family winged helix-turn-helix transcriptiona Rv2327 dppD (family_assigned) — ABC transporter ATP-binding protein dppD

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.