MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3042c · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
serB2 (requalified) — phosphoserine phosphatase SerB serB2 serC (requalified) — phosphoserine transaminase serC trpB (family_assigned) — tryptophan synthase subunit beta trpB glyA1 (requalified) — serine hydroxymethyltransferase glyA1 glyA2 (requalified) — serine hydroxymethyltransferase glyA2 cbs (requalified) — cystathionine beta-synthase cbs trpA (family_assigned) — tryptophan synthase subunit alpha trpA ilvA (requalified) — threonine ammonia-lyase ilvA pssA (requalified) — CDP-diacylglycerol--serine O-phosphatidyltransfera pssA sdaA (requalified) — L-serine ammonia-lyase sdaA Rv3038c (family_assigned) — methyltransferase domain-containing protein Rv3038c Rv3040c (requalified) — NUDIX hydrolase Rv3040c Rv3041c (family_assigned) — ABC transporter ATP-binding protein Rv3041c serA1 (requalified) — D-3-phosphoglycerate dehydrogenase serA1 serA2 (requalified) — D-3-phosphoglycerate dehydrogenase SerA serA2 thrC (requalified) — threonine synthase thrC Rv3684 (requalified) — lyase Rv3684 cysK1 (requalified) — O-acetylserine sulfhydrylase cysK1 trpC (requalified) — indole-3-glycerol phosphate synthase TrpC trpC lgt (requalified) — prolipoprotein diacylglyceryl transferase lgt trpE (requalified) — anthranilate synthase component I trpE trpD (requalified) — anthranilate phosphoribosyltransferase trpD trpG (requalified) — anthranilate synthase component II trpG gcvB (requalified) — aminomethyl-transferring glycine dehydrogenase gcvB gcvT (requalified) — aminomethyltransferase gcvT purH (requalified) — bifunctional phosphoribosylaminoimidazolecarboxami purH folD (requalified) — bifunctional methylenetetrahydrofolate dehydrogena folD purN (requalified) — phosphoribosylglycinamide formyltransferase purN gcvH (requalified) — glycine cleavage system protein GcvH gcvH metB (requalified) — cystathionine gamma-synthase metB metZ (requalified) — O-succinylhomoserine sulfhydrylase metZ cysE (requalified) — serine O-acetyltransferase cysE sahH (requalified) — adenosylhomocysteinase sahH ilvN (family_assigned) — acetolactate synthase small subunit ilvN ilvB1 (family_assigned) — acetolactate synthase large subunit IlvB ilvB1 leuB (requalified) — 3-isopropylmalate dehydrogenase leuB ilvB2 (family_assigned) — thiamine pyrophosphate-binding protein ilvB2 ilvG (requalified) — acetolactate synthase ilvG psd (requalified) — phosphatidylserine decarboxylase psd pgsA2 (family_assigned) — CDP-alcohol phosphatidyltransferase family protein pgsA2 pgsA3 (requalified) — CDP-diacylglycerol--glycerol-3-phosphate 3-phospha pgsA3 cdsA (requalified) — phosphatidate cytidylyltransferase cdsA pgsA1 (requalified) — CDP-diacylglycerol--inositol 3-phosphatidyltransfe pgsA1 echA17 (requalified) — enoyl-CoA hydratase echA17 Rv3034c (requalified) — acetyltransferase Rv3034c Rv2186c (requalified) — polyketide cyclase / dehydrase and lipid transport Rv2186c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.