MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3041c · 46 genes shown · anchor echA17 · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3041c (family_assigned) — ABC transporter ATP-binding protein Rv3041c Rv3040c (requalified) — NUDIX hydrolase Rv3040c echA17 (requalified) — enoyl-CoA hydratase echA17 Rv3038c (family_assigned) — methyltransferase domain-containing protein Rv3038c serB2 (requalified) — phosphoserine phosphatase SerB serB2 ctaD (family_assigned) — cytochrome c oxidase subunit I ctaD ugpC (family_assigned) — ABC transporter ATP-binding protein ugpC ugpC (family_assigned) — sn-glycerol-3-phosphate ABC transporter ATP-bindin ugpC gltB (family_assigned) — glutamate synthase large subunit gltB sugC (family_assigned) — trehalose ABC transporter ATP-binding protein SugC sugC Rv2326c (family_assigned) — ABC transporter ATP-binding protein Rv2326c TB22.2 (family_assigned) — RsiV family protein TB22.2 leuB (requalified) — 3-isopropylmalate dehydrogenase leuB fadB2 (requalified) — 3-hydroxybutyryl-CoA dehydrogenase FadB2 fadB2 fadB3 (requalified) — 3-hydroxybutyryl-CoA dehydrogenase FadB fadB3 Rv3034c (requalified) — acetyltransferase Rv3034c Rv2186c (requalified) — polyketide cyclase / dehydrase and lipid transport Rv2186c serC (requalified) — phosphoserine transaminase serC trpB (family_assigned) — tryptophan synthase subunit beta trpB glyA1 (requalified) — serine hydroxymethyltransferase glyA1 glyA2 (requalified) — serine hydroxymethyltransferase glyA2 cbs (requalified) — cystathionine beta-synthase cbs trpA (family_assigned) — tryptophan synthase subunit alpha trpA ctaC (family_assigned) — cytochrome c oxidase subunit II ctaC ctaE (family_assigned) — heme-copper oxidase subunit III ctaE qcrC (requalified) — cytochrome c qcrC qcrB (family_assigned) — cytochrome bc complex cytochrome b subunit qcrB qcrA (requalified) — hypothetical protein qcrA Rv2199c (family_assigned) — cytochrome c oxidase subunit 4 Rv2199c ugpA (family_assigned) — sugar ABC transporter permease ugpA ugpE (family_assigned) — carbohydrate ABC transporter permease ugpE ugpB (family_assigned) — ABC transporter substrate-binding protein ugpB sugB (family_assigned) — trehalose ABC transporter permease SugB sugB sugA (family_assigned) — trehalose ABC transporter permease SugA sugA uspA (family_assigned) — sugar ABC transporter permease uspA Rv2039c (family_assigned) — carbohydrate ABC transporter permease Rv2039c Rv2040c (family_assigned) — sugar ABC transporter permease Rv2040c Rv2041c (family_assigned) — sugar ABC transporter substrate-binding protein Rv2041c gltD (family_assigned) — glutamate synthase subunit beta gltD fprA (requalified) — ferredoxin--NADP(+) reductase FprA fprA fadH (requalified) — NADPH-dependent 2%2C4-dienoyl-CoA reductase fadH fprB (requalified) — FAD-dependent oxidoreductase fprB carB (family_assigned) — carbamoyl-phosphate synthase large subunit carB glnA1 (requalified) — type I glutamate--ammonia ligase glnA1 lpqY (family_assigned) — trehalose ABC transporter substrate-binding protei lpqY Rv2325c (family_assigned) — CbiQ family ECF transporter T component Rv2325c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.