MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3019c · 44 genes shown · anchor esxS · open gene page → · ← back to 1 hop

Evidence: Min score 0
esxR (family_assigned) — WXG100 family type VII secretion target esxR esxS (requalified) — ESAT-6 like protein EsxS esxS esxG (requalified) — type VII secretion system protein EsxG esxG PPE46 (family_assigned) — PPE family protein PPE46 PPE46 PPE56 (family_assigned) — PPE family protein PPE56 PPE56 PE27A (family_assigned) — PE family protein PE27A PE27A eccC3 (family_assigned) — type VII secretion system ESX-3 FtsK/SpoIIIE famil eccC3 eccC2 (family_assigned) — type VII secretion system ESX-2 FtsK/SpoIIIE famil eccC2 espG3 (requalified) — type VII secretion system ESX-3 associated protein espG3 PE29 (family_assigned) — PE family protein PE29 PE29 PPE34 (family_assigned) — PPE family protein PPE34 PPE34 atpB (family_assigned) — F0F1 ATP synthase subunit A atpB esxA (requalified) — ESAT-6 protein EsxA esxA esxQ (requalified) — type VII secretion system ESX-3 effector EsxQ esxQ esxH (requalified) — type VII secretion system effector EsxH esxH esxV (requalified) — ESAT-6 like protein EsxV esxV esxB (family_assigned) — type VII secretion system ESX-1 WXG100 family targ esxB eccD3 (family_assigned) — type VII secretion system ESX-3 subunit EccD3 eccD3 PPE4 (family_assigned) — PPE family protein PPE4 PPE4 Rv2738c (family_assigned) — DUF3046 domain-containing protein Rv2738c PPE55 (family_assigned) — PPE family protein PPE55 PPE55 cpnT (requalified) — outer membrane channel protein/necrotizing toxin g cpnT Rv2082 (dark) — DUF5631 domain-containing protein Rv2082 espE (requalified) — type VII secretion system ESX-1 associated protein espE Rv2209 (requalified) — MFS transporter Rv2209 PE_PGRS60 (family_assigned) — PE-PGRS family-related protein PE_PGRS60 PE_PGRS60 PE10 (family_assigned) — PE family protein PE10 PE10 eccB3 (family_assigned) — type VII secretion system ESX-3 subunit EccB3 eccB3 eccE3 (family_assigned) — type VII secretion system ESX-3 subunit EccE3 eccE3 eccA3 (requalified) — ESX-3 secretion system protein EccA eccA3 mycP3 (requalified) — type VII secretion system ESX-3 serine protease my mycP3 eccB5 (family_assigned) — type VII secretion system ESX-5 subunit EccB5 eccB5 eccD5 (family_assigned) — type VII secretion system ESX-5 subunit EccD5 eccD5 eccB2 (family_assigned) — type VII secretion system ESX-2 subunit EccB2 eccB2 eccD2 (family_assigned) — type VII secretion system ESX-2 subunit EccD2 eccD2 PPE67 (family_assigned) — PPE family protein PPE67 PPE67 PPE35 (family_assigned) — PPE family protein PPE35 PPE35 PE_PGRS48 (family_assigned) — PE-PGRS family protein PE_PGRS48 PE_PGRS48 atpH (family_assigned) — F0F1 ATP synthase subunit B/delta atpH atpC (family_assigned) — F0F1 ATP synthase subunit epsilon atpC atpE (family_assigned) — F0F1 ATP synthase subunit C atpE atpD (family_assigned) — F0F1 ATP synthase subunit beta atpD atpA (family_assigned) — F0F1 ATP synthase subunit alpha atpA atpG (family_assigned) — F0F1 ATP synthase subunit gamma atpG

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.