MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3018c · 45 genes shown · anchor esxQ · open gene page → · ← back to 1 hop

Evidence: Min score 0
PPE46 (family_assigned) — PPE family protein PPE46 PPE46 esxQ (requalified) — type VII secretion system ESX-3 effector EsxQ esxQ PE27A (family_assigned) — PE family protein PE27A PE27A esxS (requalified) — ESAT-6 like protein EsxS esxS esxR (family_assigned) — WXG100 family type VII secretion target esxR PE29 (family_assigned) — PE family protein PE29 PE29 Rv2738c (family_assigned) — DUF3046 domain-containing protein Rv2738c mmpS1 (family_assigned) — MmpS family protein mmpS1 Rv1682 (family_assigned) — hypothetical protein Rv1682 PE_PGRS34 (family_assigned) — PE-PGRS family protein PE_PGRS34 PE_PGRS34 Rv3732 (dark) — DUF2330 domain-containing protein Rv3732 Rv1754c (requalified) — DUF4185 domain-containing protein Rv1754c PE_PGRS33 (family_assigned) — PE-PGRS family protein PE_PGRS33 PE_PGRS33 esxG (requalified) — type VII secretion system protein EsxG esxG eccC3 (family_assigned) — type VII secretion system ESX-3 FtsK/SpoIIIE famil eccC3 PE_PGRS60 (family_assigned) — PE-PGRS family-related protein PE_PGRS60 PE_PGRS60 PE10 (family_assigned) — PE family protein PE10 PE10 esxH (requalified) — type VII secretion system effector EsxH esxH esxV (requalified) — ESAT-6 like protein EsxV esxV esxB (family_assigned) — type VII secretion system ESX-1 WXG100 family targ esxB PPE56 (family_assigned) — PPE family protein PPE56 PPE56 PPE67 (family_assigned) — PPE family protein PPE67 PPE67 Rv2739c (requalified) — glycosyltransferase Rv2739c ephG (requalified) — epoxide hydrolase ephG recX (requalified) — recombination regulator RecX recX recA (requalified) — intein-containing recombinase RecA recA whiB3 (family_assigned) — redox-responsive transcriptional regulator WhiB3 whiB3 Rv0880 (family_assigned) — MarR family transcriptional regulator Rv0880 mmpL1 (requalified) — RND transporter MmpL1 mmpL1 fadD30 (requalified) — long-chain-fatty-acid--AMP ligase FadD30 fadD30 pks6 (requalified) — membrane bound polyketide synthase pks6 tyzA (requalified) — hypothetical protein tyzA Rv3096 (requalified) — 1%2C4-beta-xylanase Rv3096 Rv1733c (family_assigned) — hypothetical protein Rv1733c Rv0713 (dark) — DUF4436 domain-containing protein Rv0713 Rv0804 (family_assigned) — CPBP family intramembrane glutamic endopeptidase Rv0804 Rv1680 (family_assigned) — phosphate/phosphite/phosphonate ABC transporter su Rv1680 rsdA (requalified) — anti-sigma D factor RsdA rsdA Rv0210 (family_assigned) — hypothetical protein Rv0210 rplU (requalified) — 50S ribosomal protein L21 rplU rpsT (requalified) — 30S ribosomal protein S20 rpsT rplM (requalified) — 50S ribosomal protein L13 rplM rpmI (requalified) — 50S ribosomal protein L35 rpmI rpsP (requalified) — 30S ribosomal protein S16 rpsP rpmF (requalified) — 50S ribosomal protein L32 rpmF

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.