MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3014c · 46 genes shown · anchor ruvB · open gene page → · ← back to 1 hop

Evidence: Min score 0
ligA (requalified) — NAD-dependent DNA ligase LigA ligA fmu (requalified) — 16S rRNA m5C967 methyltransferase fmu ligB (requalified) — ATP-dependent DNA ligase ligB Rv3015c (requalified) — methionine synthase Rv3015c leuS (requalified) — leucine--tRNA ligase leuS ruvB (requalified) — Holliday junction branch migration DNA helicase Ru ruvB uvrD1 (requalified) — ATP-dependent DNA helicase UvrD uvrD1 murC (requalified) — UDP-N-acetylmuramate--L-alanine ligase murC pheT (family_assigned) — phenylalanine--tRNA ligase subunit beta pheT nusA (requalified) — transcription termination factor NusA nusA lpqA (family_assigned) — sensor domain-containing protein lpqA murG (requalified) — undecaprenyldiphospho-muramoylpentapeptide beta-N- murG gatC (family_assigned) — Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subun gatC fmt (requalified) — methionyl-tRNA formyltransferase fmt Rv3404c (requalified) — dTDP-4-amino-4%2C6-dideoxyglucose formyltransferas Rv3404c pstP (requalified) — phosphoserine/threonine phosphatase PstP pstP rplJ (requalified) — 50S ribosomal protein L10 rplJ rpsJ (requalified) — 30S ribosomal protein S10 rpsJ lppK (family_assigned) — hypothetical protein lppK dnaN (family_assigned) — DNA polymerase III subunit beta dnaN polA (requalified) — DNA polymerase I polA Rv2090 (requalified) — 5'-3' exonuclease Rv2090 fadE22 (requalified) — acyl-CoA dehydrogenase fadE22 Rv2172c (requalified) — mycobacterial-type methylenetetrahydrofolate reduc Rv2172c metK (requalified) — S-adenosylmethionine synthetase metK ldtMt3 (requalified) — L%2CD-transpeptidase LdtMt3 ldtMt3 Rv0192 (family_assigned) — hypothetical protein Rv0192 metS (requalified) — methionine--tRNA ligase metS ileS (requalified) — isoleucine--tRNA ligase ileS gltS (requalified) — glutamate--tRNA ligase gltS argS (requalified) — arginine--tRNA ligase argS Rv1354c (requalified) — bifunctional diguanylate cyclase/phosphodiesterase Rv1354c ruvA (requalified) — Holliday junction branch migration protein RuvA ruvA ruvC (requalified) — crossover junction endodeoxyribonuclease RuvC ruvC clpB (requalified) — chaperone protein ClpB clpB vapC40 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC40 adnB (requalified) — ATP-dependent DNA helicase AdnB adnB uvrD2 (requalified) — ATP-dependent DNA helicase UvrD2 uvrD2 adnA (requalified) — ATP-dependent DNA helicase AdnA adnA mku (requalified) — Ku protein mku uvrB (family_assigned) — excinuclease ABC subunit UvrB uvrB Rv0948c (requalified) — chorismate mutase Rv0948c murD (requalified) — UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase murD ftsW (family_assigned) — putative lipid II flippase FtsW ftsW ftsQ (requalified) — cell division protein FtsQ ftsQ murX (requalified) — phospho-N-acetylmuramoyl-pentapeptide-transferase murX

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.