MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3009c · 45 genes shown · anchor gatA · open gene page → · ← back to 1 hop

Evidence: Min score 0
gatB (family_assigned) — Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subun gatB gatA (family_assigned) — Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subun gatA gatC (family_assigned) — Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subun gatC aspS (requalified) — aspartate--tRNA ligase aspS amiD (requalified) — amidase amiD amiA2 (requalified) — amidase amiA2 amiB2 (requalified) — amidase amiB2 Rv3175 (requalified) — amidase Rv3175 amiC (requalified) — amidase amiC atpH (family_assigned) — F0F1 ATP synthase subunit B/delta atpH gltS (requalified) — glutamate--tRNA ligase gltS guaA (requalified) — glutamine-hydrolyzing GMP synthase guaA pfkA (requalified) — ATP-dependent 6-phosphofructokinase pfkA Rv3013 (family_assigned) — amino acid-binding protein Rv3013 Rv2571c (family_assigned) — aromatic acid exporter family protein Rv2571c hisS (requalified) — histidine--tRNA ligase hisS alaS (requalified) — alanine--tRNA ligase alaS acyP (requalified) — acylphosphatase acyP Rv3551 (family_assigned) — CoA transferase subunit A Rv3551 echA18 (requalified) — enoyl-CoA hydratase echA18 Rv2361c (requalified) — decaprenyl diphosphate synthase Rv2361c recO (requalified) — DNA repair protein RecO recO Rv1264 (requalified) — adenylate cyclase Rv1264 Rv0223c (requalified) — aldehyde dehydrogenase Rv0223c Rv3174 (family_assigned) — SDR family oxidoreductase Rv3174 pcd (requalified) — piperideine-6-carboxylic acid dehydrogenase pcd tsf (requalified) — translation elongation factor Ts tsf rpsB (requalified) — 30S ribosomal protein S2 rpsB atpF (family_assigned) — F0F1 ATP synthase subunit B atpF atpG (family_assigned) — F0F1 ATP synthase subunit gamma atpG atpA (family_assigned) — F0F1 ATP synthase subunit alpha atpA atpD (family_assigned) — F0F1 ATP synthase subunit beta atpD atpC (family_assigned) — F0F1 ATP synthase subunit epsilon atpC atpE (family_assigned) — F0F1 ATP synthase subunit C atpE rplW (requalified) — 50S ribosomal protein L23 rplW rplR (requalified) — 50S ribosomal protein L18 rplR rplF (requalified) — 50S ribosomal protein L6 rplF rplV (requalified) — 50S ribosomal protein L22 rplV rplM (requalified) — 50S ribosomal protein L13 rplM rplJ (requalified) — 50S ribosomal protein L10 rplJ guaB2 (requalified) — IMP dehydrogenase guaB2 guaB1 (family_assigned) — GuaB1 family IMP dehydrogenase-related protein guaB1 guaB3 (family_assigned) — GuaB3 family IMP dehydrogenase-related protein guaB3 apt (requalified) — adenine phosphoribosyltransferase apt argS (requalified) — arginine--tRNA ligase argS

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.