MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3007c · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3007c (family_assigned) — flavin reductase family protein Rv3007c Rv1939 (family_assigned) — flavin reductase family protein Rv1939 Rv0245 (family_assigned) — flavin reductase family protein Rv0245 gatB (family_assigned) — Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subun gatB Rv3008 (family_assigned) — MgtC/SapB family protein Rv3008 Rv3079c (requalified) — LLM class F420-dependent oxidoreductase Rv3079c Rv0791c (requalified) — LLM class flavin-dependent oxidoreductase Rv0791c Rv3618 (requalified) — LLM class flavin-dependent oxidoreductase Rv3618 Rv1936 (requalified) — LLM class flavin-dependent oxidoreductase Rv1936 fdxB (requalified) — fatty acid desaturase fdxB ribA1 (requalified) — riboflavin biosynthesis protein RibA ribA1 ephB (requalified) — epoxide hydrolase EphB ephB Rv1937 (requalified) — FAD-binding oxidoreductase Rv1937 Rv1941 (family_assigned) — SDR family oxidoreductase Rv1941 fadE5 (requalified) — acyl-CoA dehydrogenase fadE5 Rv0246 (family_assigned) — integral membrane protein Rv0246 Rv3192 (family_assigned) — hypothetical protein Rv3192 fgd1 (requalified) — glucose-6-phosphate dehydrogenase (coenzyme-F420) fgd1 Rv3833 (family_assigned) — helix-turn-helix transcriptional regulator Rv3833 gatA (family_assigned) — Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subun gatA gatC (family_assigned) — Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subun gatC aspS (requalified) — aspartate--tRNA ligase aspS amiD (requalified) — amidase amiD amiA2 (requalified) — amidase amiA2 amiB2 (requalified) — amidase amiB2 Rv1624c (family_assigned) — HdeD family acid-resistance protein Rv1624c ctpH (requalified) — cation-translocating P-type ATPase ctpH ctpF (requalified) — cation-transporting P-type ATPase ctpF ctpE (requalified) — cation-translocating P-type ATPase ctpE ctpI (requalified) — cation-transporter ATPase I ctpI pknK (requalified) — serine/threonine protein kinase PknK pknK Rv2893 (requalified) — LLM class F420-dependent oxidoreductase Rv2893 Rv2951c (requalified) — phthiodiolone/phenolphthiodiolone dimycocerosates Rv2951c fbiB (requalified) — coenzyme F420-0:L-glutamate ligase fbiB Rv0044c (requalified) — LLM class F420-dependent oxidoreductase Rv0044c Rv3520c (requalified) — coenzyme F420-dependent oxidoreductase Rv3520c Rv0790c (family_assigned) — transglutaminase-like domain-containing protein Rv0790c Rv0792c (family_assigned) — GntR family transcriptional regulator Rv0792c Rv0789c (family_assigned) — hypothetical protein Rv0789c Rv0793 (family_assigned) — putative quinol monooxygenase Rv0793 Rv3072c (family_assigned) — hypothetical protein Rv3072c ephA (requalified) — epoxide hydrolase EphA ephA ephG (requalified) — epoxide hydrolase ephG Rv0517 (requalified) — acyltransferase Rv0517 Rv3779 (family_assigned) — DUF6541 family protein Rv3779 echA13 (requalified) — enoyl-CoA hydratase echA13

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.