MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3006 · 46 genes shown · anchor lprC · open gene page → · ← back to 1 hop

Evidence: Min score 0
lppZ (family_assigned) — sorbosone dehydrogenase family protein lppZ lmeA (requalified) — mannan chain length control protein LmeA lmeA Rv1109c (requalified) — lipid droplet-associated protein Rv1109c ttfA (requalified) — trehalose monomycolate transport factor TtfA ttfA Rv2468c (requalified) — hypothetical protein Rv2468c cei (requalified) — envelope integrity protein Cei cei lprC (family_assigned) — DUF3558 domain-containing protein lprC Rv2091c (family_assigned) — DUF4333 domain-containing protein Rv2091c hbhA (requalified) — heparin-binding hemagglutinin HbhA hbhA eccD3 (family_assigned) — type VII secretion system ESX-3 subunit EccD3 eccD3 cfp6 (requalified) — low molecular weight protein antigen 6 cfp6 Rv2672 (requalified) — alpha/beta fold hydrolase Rv2672 Rv3212 (family_assigned) — hypothetical protein Rv3212 thiX (family_assigned) — thioredoxin family protein thiX Rv2743c (family_assigned) — hypothetical protein Rv2743c xseA (family_assigned) — exodeoxyribonuclease VII large subunit xseA xseB (family_assigned) — exodeoxyribonuclease VII small subunit xseB Rv1106c (requalified) — 3 beta-hydroxysteroid dehydrogenase/delta 5-->4-is Rv1106c lytB2 (requalified) — 4-hydroxy-3-methylbut-2-enyl diphosphate reductase lytB2 Rv3850 (family_assigned) — DUF6474 family protein Rv3850 Rv0385 (requalified) — FAD-binding oxidoreductase Rv0385 Rv1125 (family_assigned) — WS/DGAT domain-containing protein Rv1125 pyrE (requalified) — orotate phosphoribosyltransferase pyrE pyrD (requalified) — quinone-dependent dihydroorotate dehydrogenase pyrD carB (family_assigned) — carbamoyl-phosphate synthase large subunit carB Rv0381c (dark) — hypothetical protein Rv0381c Rv2468A (family_assigned) — hypothetical protein Rv2468A qcrA (requalified) — hypothetical protein qcrA Rv2199c (family_assigned) — cytochrome c oxidase subunit 4 Rv2199c ctaC (family_assigned) — cytochrome c oxidase subunit II ctaC qcrB (family_assigned) — cytochrome bc complex cytochrome b subunit qcrB Rv1638A (family_assigned) — hypothetical protein Rv1638A Rv0556 (family_assigned) — DUF3592 domain-containing protein Rv0556 Rv2446c (dark) — DUF4233 domain-containing protein Rv2446c lprB (family_assigned) — DUF3558 domain-containing protein lprB rplS (requalified) — 50S ribosomal protein L19 rplS rplT (requalified) — 50S ribosomal protein L20 rplT rplQ (requalified) — 50S ribosomal protein L17 rplQ rpmA (requalified) — 50S ribosomal protein L27 rpmA rplU (requalified) — 50S ribosomal protein L21 rplU Rv3311 (family_assigned) — primosomal protein Rv3311 Rv2520c (dark) — DUF3618 domain-containing protein Rv2520c Rv0477 (dark) — DUF2599 domain-containing protein Rv0477 Rv0476 (requalified) — transmembrane protein Rv0476 Rv0996 (family_assigned) — hypothetical protein Rv0996 eccB3 (family_assigned) — type VII secretion system ESX-3 subunit EccB3 eccB3

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.