MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2997 · 37 genes shown · anchor serA1 · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv2997 (requalified) — NAD(P)/FAD-dependent oxidoreductase Rv2997 phyA (requalified) — presqualene diphosphate synthase HpnD phyA serA1 (requalified) — D-3-phosphoglycerate dehydrogenase serA1 leuB (requalified) — 3-isopropylmalate dehydrogenase leuB Rv2850c (family_assigned) — magnesium chelatase subunit D family protein Rv2850c Rv2998 (dark) — hypothetical protein Rv2998 pafB (family_assigned) — YafY family protein pafB cobN (family_assigned) — cobaltochelatase subunit CobN cobN idsA1 (requalified) — multifunctional dimethylallyltransferase/geranyltr idsA1 idsA2 (requalified) — bifunctional (2E%2C6E)-farnesyl/geranyl diphosphat idsA2 Rv3399 (requalified) — S-adenosylmethionine-dependent methyltransferase Rv3399 grcC1 (requalified) — polyprenyl-diphosphate synthase GrcC grcC1 grcC2 (requalified) — polyprenyl-diphosphate synthase GrcC grcC2 idsB (family_assigned) — polyprenyl synthetase family protein idsB serC (requalified) — phosphoserine transaminase serC serA2 (requalified) — D-3-phosphoglycerate dehydrogenase SerA serA2 gpm1 (requalified) — 2,3-bisphosphoglycerate-dependent phosphoglycerate gpm1 thrC (requalified) — threonine synthase thrC leuC (family_assigned) — 3-isopropylmalate dehydratase large subunit leuC leuD (family_assigned) — 3-isopropylmalate dehydratase small subunit leuD ilvN (family_assigned) — acetolactate synthase small subunit ilvN ilvB1 (family_assigned) — acetolactate synthase large subunit IlvB ilvB1 ilvB2 (family_assigned) — thiamine pyrophosphate-binding protein ilvB2 Rv0958 (family_assigned) — ATP-binding protein Rv0958 hemY (requalified) — protoporphyrinogen oxidase hemY cobO (requalified) — cob(I)alamin adenosyltransferase cobO hemZ (requalified) — ferrochelatase hemZ cobB (requalified) — cobyrinate a%2Cc-diamide synthase cobB pafC (family_assigned) — YafY family protein pafC pafA (requalified) — Pup--protein ligase pafA rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ rbpA (family_assigned) — RNA polymerase-binding protein RbpA rbpA tatA (family_assigned) — Sec-independent protein translocase subunit TatA tatA rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA cobIJ (requalified) — precorrin-2 C(20)-methyltransferase cobIJ cobL (requalified) — bifunctional cobalt-precorrin-7 (C(5))-methyltrans cobL Rv1314c (requalified) — cob(I)yrinic acid a%2Cc-diamide adenosyltransferas Rv1314c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.