MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2996c · 46 genes shown · anchor leuB · open gene page → · ← back to 1 hop

Evidence: Min score 0
serA1 (requalified) — D-3-phosphoglycerate dehydrogenase serA1 serC (requalified) — phosphoserine transaminase serC leuB (requalified) — 3-isopropylmalate dehydrogenase leuB serA2 (requalified) — D-3-phosphoglycerate dehydrogenase SerA serA2 gpm1 (requalified) — 2,3-bisphosphoglycerate-dependent phosphoglycerate gpm1 Rv2997 (requalified) — NAD(P)/FAD-dependent oxidoreductase Rv2997 thrC (requalified) — threonine synthase thrC ilvN (family_assigned) — acetolactate synthase small subunit ilvN thrA (requalified) — homoserine dehydrogenase thrA rplP (requalified) — 50S ribosomal protein L16 rplP rplF (requalified) — 50S ribosomal protein L6 rplF pepE (family_assigned) — Xaa-Pro peptidase family protein pepE pepQ (family_assigned) — Xaa-Pro peptidase family protein pepQ serB2 (requalified) — phosphoserine phosphatase SerB serB2 Rv3684 (requalified) — lyase Rv3684 cysK1 (requalified) — O-acetylserine sulfhydrylase cysK1 leuC (family_assigned) — 3-isopropylmalate dehydratase large subunit leuC leuD (family_assigned) — 3-isopropylmalate dehydratase small subunit leuD ilvB1 (family_assigned) — acetolactate synthase large subunit IlvB ilvB1 ilvB2 (family_assigned) — thiamine pyrophosphate-binding protein ilvB2 fucA (requalified) — L-fuculose-phosphate aldolase fucA xylB (requalified) — FGGY-family carbohydrate kinase xylB Rv0730 (requalified) — GCN5-like N-acetyltransferase Rv0730 pgk (requalified) — phosphoglycerate kinase pgk eno (requalified) — phosphopyruvate hydratase eno fba (requalified) — class II fructose-bisphosphate aldolase fba pgi (requalified) — glucose-6-phosphate isomerase pgi phyA (requalified) — presqualene diphosphate synthase HpnD phyA Rv2850c (family_assigned) — magnesium chelatase subunit D family protein Rv2850c Rv2998 (dark) — hypothetical protein Rv2998 pafB (family_assigned) — YafY family protein pafB thrB (requalified) — homoserine kinase thrB ilvA (requalified) — threonine ammonia-lyase ilvA argS (requalified) — arginine--tRNA ligase argS lysA (requalified) — diaminopimelate decarboxylase lysA ilvC (requalified) — ketol-acid reductoisomerase ilvC ilvG (requalified) — acetolactate synthase ilvG ilvX (family_assigned) — acetolactate synthase large subunit ilvX asd (requalified) — aspartate-semialdehyde dehydrogenase asd metA (requalified) — homoserine O-acetyltransferase metA dapA (requalified) — 4-hydroxy-tetrahydrodipicolinate synthase dapA rpsD (requalified) — 30S ribosomal protein S4 rpsD rplW (requalified) — 50S ribosomal protein L23 rplW rpsG (requalified) — 30S ribosomal protein S7 rpsG rpsH (requalified) — 30S ribosomal protein S8 rpsH rplS (requalified) — 50S ribosomal protein L19 rplS

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.