MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2990c · 43 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv2990c (requalified) — class I SAM-dependent methyltransferase Rv2990c PPE3 (family_assigned) — PPE family protein PPE3 PPE3 rpmB2 (requalified) — 50S ribosomal protein L28 rpmB2 Rv0106 (family_assigned) — GTP-binding protein Rv0106 rpsN2 (requalified) — 30S ribosomal protein S14 rpsN2 Rv2059 (family_assigned) — hypothetical protein Rv2059 eccA3 (requalified) — ESX-3 secretion system protein EccA eccA3 Rv2991 (requalified) — PPOX class F420-dependent oxidoreductase Rv2991 Rv3134c (requalified) — universal stress protein Rv3134c ideR (family_assigned) — iron-dependent transcriptional regulator IdeR ideR Rv0281 (requalified) — class I SAM-dependent methyltransferase Rv0281 rpmG1 (requalified) — 50S ribosomal protein L33 rpmG1 rpsR2 (requalified) — 30S ribosomal protein S18 rpsR2 rplI (requalified) — 50S ribosomal protein L9 rplI rpmF (requalified) — 50S ribosomal protein L32 rpmF rpsF (requalified) — 30S ribosomal protein S6 rpsF rpsJ (requalified) — 30S ribosomal protein S10 rpsJ rpsI (requalified) — 30S ribosomal protein S9 rpsI rpsC (requalified) — 30S ribosomal protein S3 rpsC rpsS (requalified) — 30S ribosomal protein S19 rpsS Rv2060 (family_assigned) — integral membrane protein Rv2060 eccB3 (family_assigned) — type VII secretion system ESX-3 subunit EccB3 eccB3 eccC3 (family_assigned) — type VII secretion system ESX-3 FtsK/SpoIIIE famil eccC3 PPE4 (family_assigned) — PPE family protein PPE4 PPE4 PE5 (family_assigned) — PE family protein PE5 PE5 espG3 (requalified) — type VII secretion system ESX-3 associated protein espG3 Rv0910 (family_assigned) — SRPBCC family protein Rv0910 Rv2216 (family_assigned) — TIGR01777 family oxidoreductase Rv2216 Rv1125 (family_assigned) — WS/DGAT domain-containing protein Rv1125 arcA (requalified) — arginine deiminase arcA acrA1 (family_assigned) — SDR family oxidoreductase acrA1 devR (requalified) — two-component system response regulator DevR devR devS (requalified) — two-component system sensor histidine kinase DevS devS Rv1733c (family_assigned) — hypothetical protein Rv1733c Rv3127 (requalified) — NAD(P)H nitroreductase Rv3127 acg (family_assigned) — FMN-binding protein Acg acg Rv3131 (requalified) — NAD(P)H nitroreductase Rv3131 sigB (family_assigned) — sigma-70 family RNA polymerase sigma factor SigB sigB pepD (requalified) — serine protease PepD pepD 35kd_ag (family_assigned) — hypothetical protein 35kd_ag Rv2917 (family_assigned) — hypothetical protein Rv2917 Rv2709 (dark) — DUF3099 domain-containing protein Rv2709 gltB (family_assigned) — glutamate synthase large subunit gltB

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.