MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2984 · 46 genes shown · anchor ppk2 · open gene page → · ← back to 1 hop

Evidence: Min score 0
ppk1 (requalified) — RNA degradosome polyphosphate kinase ppk1 ppk2 (requalified) — polyphosphate kinase ppk2 ppa (requalified) — inorganic diphosphatase ppa mutT1 (requalified) — NUDIX hydrolase mutT1 mshD (requalified) — mycothiol synthase mshD Rv0496 (family_assigned) — hypothetical protein Rv0496 ppx2 (requalified) — exopolyphosphatase Ppx2 ppx2 cofC (requalified) — 2-phospho-L-lactate guanylyltransferase cofC gpdA2 (requalified) — NAD(P)H-dependent glycerol-3-phosphate dehydrogena gpdA2 polA (requalified) — DNA polymerase I polA ddlA (requalified) — D-alanine--D-alanine ligase DdlA ddlA Rv2090 (requalified) — 5'-3' exonuclease Rv2090 ppgK (family_assigned) — ROK family protein ppgK Rv3231c (family_assigned) — hypothetical protein Rv3231c tgs3 (requalified) — diacyglycerol O-acyltransferase tgs3 Rv3233c (family_assigned) — Possible triacylglycerol synthase (diacylglycerol Rv3233c Rv0213c (requalified) — methyltransferase Rv0213c atpH (family_assigned) — F0F1 ATP synthase subunit B/delta atpH atpF (family_assigned) — F0F1 ATP synthase subunit B atpF atpE (family_assigned) — F0F1 ATP synthase subunit C atpE atpG (family_assigned) — F0F1 ATP synthase subunit gamma atpG atpA (family_assigned) — F0F1 ATP synthase subunit alpha atpA atpD (family_assigned) — F0F1 ATP synthase subunit beta atpD pheT (family_assigned) — phenylalanine--tRNA ligase subunit beta pheT Rv1700 (requalified) — ADP-ribose diphosphatase Rv1700 cobIJ (requalified) — precorrin-2 C(20)-methyltransferase cobIJ Rv0818 (requalified) — response regulator transcription factor Rv0818 Rv2466c (family_assigned) — Rv2466c family mycothiol-dependent reductase Rv2466c mshC (requalified) — cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D mshC Rv1998c (family_assigned) — isocitrate lyase/phosphoenolpyruvate mutase family Rv1998c mca (requalified) — mycothiol conjugate amidase Mca mca relA (family_assigned) — RelA/SpoT family protein relA Rv0497 (family_assigned) — hypothetical protein Rv0497 Rv0498 (requalified) — sugar phosphate isomerase/epimerase Rv0498 Rv0499 (family_assigned) — thioesterase family protein Rv0499 proC (requalified) — pyrroline-5-carboxylate reductase proC Rv1025 (dark) — hypothetical protein Rv1025 Rv1024 (family_assigned) — septum formation initiator family protein Rv1024 eno (requalified) — phosphopyruvate hydratase eno fbiA (requalified) — 2-phospho-L-lactate transferase fbiA fbiB (requalified) — coenzyme F420-0:L-glutamate ligase fbiB ddn (requalified) — deazaflavin-dependent nitroreductase Ddn ddn Rv1261c (requalified) — F420H(2)-dependent quinone reductase Rv1261c fgd2 (requalified) — F420-dependent hydroxymycolic acid dehydrogenase fgd2 glpD2 (requalified) — glycerol-3-phosphate dehydrogenase/oxidase glpD2 glpD1 (requalified) — glycerol-3-phosphate dehydrogenase/oxidase glpD1

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.