MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2976c · 45 genes shown · anchor thiL · open gene page → · ← back to 1 hop

Evidence: Min score 0
ung (requalified) — uracil-DNA glycosylase ung thiL (requalified) — thiamine-phosphate kinase thiL xthA (requalified) — exodeoxyribonuclease III protein XthA xthA Rv2979c (family_assigned) — IS607 family transposase Rv2979c tnpB (family_assigned) — IS607 family element RNA-guided endonuclease TnpB tnpB Rv2980 (dark) — DUF3515 domain-containing protein Rv2980 dnaN (family_assigned) — DNA polymerase III subunit beta dnaN lppK (family_assigned) — hypothetical protein lppK trpD (requalified) — anthranilate phosphoribosyltransferase trpD nth (requalified) — endonuclease III nth end (requalified) — deoxyribonuclease IV end recA (requalified) — intein-containing recombinase RecA recA pepN (requalified) — aminopeptidase PepN pepN radA (requalified) — DNA repair protein RadA radA thiE (requalified) — thiamine phosphate synthase thiE adk (requalified) — adenylate kinase adk rsgA (family_assigned) — ribosome small subunit-dependent GTPase A rsgA def (requalified) — peptide deformylase def Rv0428c (family_assigned) — GNAT family N-acetyltransferase Rv0428c mutY (requalified) — A/G-specific adenine glycosylase mutY Rv2885c (requalified) — transposase Rv2885c Rv3827c (requalified) — transposase Rv3827c tnpB (family_assigned) — IS607 family element RNA-guided endonuclease TnpB tnpB Rv0605 (family_assigned) — IS607-like element IS1536 family transposase Rv0605 Rv2792c (family_assigned) — IS607-like element IS1537 family transposase Rv2792c Rv0556 (family_assigned) — DUF3592 domain-containing protein Rv0556 Rv2446c (dark) — DUF4233 domain-containing protein Rv2446c Rv3212 (family_assigned) — hypothetical protein Rv3212 Rv3311 (family_assigned) — primosomal protein Rv3311 Rv1109c (requalified) — lipid droplet-associated protein Rv1109c Rv3438 (family_assigned) — alpha/beta hydrolase Rv3438 polA (requalified) — DNA polymerase I polA dnaE1 (family_assigned) — DNA polymerase III subunit alpha dnaE1 Rv2413c (family_assigned) — DNA polymerase III subunit delta Rv2413c Rv3644c (family_assigned) — DNA polymerase III subunit delta' Rv3644c dnaZX (family_assigned) — DNA polymerase III subunits gamma/tau dnaZX dnaA (requalified) — chromosomal replication initiator protein DnaA dnaA Rv2090 (requalified) — 5'-3' exonuclease Rv2090 helZ (requalified) — DEAD/DEAH box helicase helZ ligC (requalified) — ATP-dependent DNA ligase ligC ligB (requalified) — ATP-dependent DNA ligase ligB trpG (requalified) — anthranilate synthase component II trpG trpE (requalified) — anthranilate synthase component I trpE mbtI (requalified) — salicylate synthase mbtI trpC (requalified) — indole-3-glycerol phosphate synthase TrpC trpC

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.