MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2973c · 46 genes shown · anchor murB · open gene page → · ← back to 1 hop

Evidence: Min score 0
recG (requalified) — ATP-dependent DNA helicase RecG recG Rv2974c (family_assigned) — hypothetical protein Rv2974c Rv2972c (family_assigned) — HNH endonuclease family protein Rv2972c Rv2975c (family_assigned) — hypothetical protein Rv2975c murB (requalified) — UDP-N-acetylmuramate dehydrogenase murB dprA (requalified) — DNA-processing protein DprA dprA rplR (requalified) — 50S ribosomal protein L18 rplR murE (requalified) — UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-d murE ftsW (family_assigned) — putative lipid II flippase FtsW ftsW ponA1 (requalified) — bifunctional penicillin-insensitive transglycosyla ponA1 topA (requalified) — type I DNA topoisomerase topA murF (requalified) — UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanin murF fmu (requalified) — 16S rRNA m5C967 methyltransferase fmu Rv2417c (family_assigned) — DegV family protein Rv2417c TB16.3 (family_assigned) — SRPBCC family protein TB16.3 Rv0854 (family_assigned) — SRPBCC family protein Rv0854 rnpA (requalified) — ribonuclease P protein component rnpA rhlE (requalified) — DEAD/DEAH box helicase rhlE deaD (requalified) — DEAD/DEAH box helicase deaD Rv1081c (dark) — DUF4307 domain-containing protein Rv1081c Rv3205c (family_assigned) — hypothetical protein Rv3205c murC (requalified) — UDP-N-acetylmuramate--L-alanine ligase murC murA (requalified) — UDP-N-acetylglucosamine 1-carboxyvinyltransferase murA lprQ (requalified) — L%2CD-transpeptidase LdtMt5 lprQ Rv0481c (family_assigned) — DUF2505 domain-containing protein Rv0481c murG (requalified) — undecaprenyldiphospho-muramoylpentapeptide beta-N- murG Rv0480c (family_assigned) — carbon-nitrogen hydrolase family protein Rv0480c Rv2897c (family_assigned) — YifB family Mg chelatase-like AAA ATPase Rv2897c Rv2898c (family_assigned) — YraN family protein Rv2898c Rv1364c (family_assigned) — sigma factor regulatory protein Rv1364c viuB (requalified) — siderophore-interacting protein viuB Rv2551c (family_assigned) — A24 family peptidase Rv2551c Rv3242c (family_assigned) — ComF family protein Rv3242c rpmG2 (requalified) — 50S ribosomal protein L33 rpmG2 rplY (requalified) — 50S ribosomal protein L25/general stress protein C rplY rpmA (requalified) — 50S ribosomal protein L27 rpmA rplJ (requalified) — 50S ribosomal protein L10 rplJ rplD (requalified) — 50S ribosomal protein L4 rplD rplM (requalified) — 50S ribosomal protein L13 rplM murD (requalified) — UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase murD murX (requalified) — phospho-N-acetylmuramoyl-pentapeptide-transferase murX ftsQ (requalified) — cell division protein FtsQ ftsQ Rv0051 (family_assigned) — glycosyltransferase family 87 protein Rv0051 pbpA (requalified) — D%2CD-transpeptidase PbpA pbpA rodA (requalified) — cell shape-determining peptidoglycan glycosyltrans rodA rpsF (requalified) — 30S ribosomal protein S6 rpsF

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.