MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2967c · 36 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
pca (requalified) — pyruvate carboxylase pca prpC (requalified) — 2-methylcitrate synthase prpC gltA2 (requalified) — citrate synthase gltA2 citA (requalified) — citrate synthase 2 citA pykA (requalified) — pyruvate kinase pykA mdh (requalified) — malate dehydrogenase mdh mez (requalified) — NAD-dependent malic enzyme mez bkdB (family_assigned) — 3-methyl-2-oxobutanoate dehydrogenase subunit beta bkdB mqo (requalified) — malate dehydrogenase (quinone) mqo pckA (requalified) — phosphoenolpyruvate carboxykinase (GTP) pckA ppdK (requalified) — pyruvate%2C phosphate dikinase ppdK mftD (requalified) — pre-mycofactocin synthase MftD mftD lldD2 (requalified) — quinone-dependent L-lactate dehydrogenase lldD2 prpD (requalified) — 2-methylcitrate dehydratase prpD acn (requalified) — iron-regulated aconitate hydratase Acn acn acs (requalified) — acetate--CoA ligase acs bkdC (family_assigned) — dihydrolipoamide acetyltransferase family protein bkdC glcB (requalified) — malate synthase G glcB Rv1248c (family_assigned) — multifunctional oxoglutarate decarboxylase/oxoglut Rv1248c eno (requalified) — phosphopyruvate hydratase eno rplJ (requalified) — 50S ribosomal protein L10 rplJ rplX (requalified) — 50S ribosomal protein L24 rplX rplB (requalified) — 50S ribosomal protein L2 rplB rplE (requalified) — 50S ribosomal protein L5 rplE rplF (requalified) — 50S ribosomal protein L6 rplF fum (requalified) — class II fumarate hydratase fum bkdA (family_assigned) — pyruvate dehydrogenase (acetyl-transferring) E1 co bkdA Rv0843 (family_assigned) — thiamine pyrophosphate-dependent dehydrogenase E1 Rv0843 lpdC (requalified) — dihydrolipoyl dehydrogenase lpdC dlaT (requalified) — 2-oxoglutarate dehydrogenase%2C E2 component%2C di dlaT Rv2455c (family_assigned) — 2-oxoacid:acceptor oxidoreductase subunit alpha Rv2455c Rv1126c (family_assigned) — MarR family transcriptional regulator Rv1126c Rv2454c (family_assigned) — 2-oxoacid:ferredoxin oxidoreductase subunit beta Rv2454c mftC (requalified) — mycofactocin radical SAM maturase mftC mftB (requalified) — mycofactocin biosynthesis chaperone MftB mftB Rv1871c (family_assigned) — nitroreductase family deazaflavin-dependent oxidor Rv1871c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.