MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2966c · 46 genes shown · anchor kdtB · open gene page → · ← back to 1 hop

Evidence: Min score 0
rsmD (requalified) — 16S rRNA (guanine(966)-N(2))-methyltransferase Rsm rsmD kdtB (requalified) — pantetheine-phosphate adenylyltransferase kdtB pca (requalified) — pyruvate carboxylase pca yidD (requalified) — membrane protein insertion efficiency factor YidD yidD Rv2968c (family_assigned) — vitamin K epoxide reductase family protein Rv2968c Rv2969c (requalified) — mycothiol-dependent reductase Rv2969c lipN (requalified) — lipase/esterase LipN lipN engA (requalified) — ribosome biogenesis GTPase Der engA rnpA (requalified) — ribonuclease P protein component rnpA rnhB (requalified) — ribonuclease HII rnhB Rv1225c (family_assigned) — HAD-IIA family hydrolase Rv1225c pheT (family_assigned) — phenylalanine--tRNA ligase subunit beta pheT rfbE (family_assigned) — ABC transporter ATP-binding protein rfbE dfp (requalified) — bifunctional phosphopantothenoylcysteine decarboxy dfp Rv3600c (requalified) — type III pantothenate kinase Rv3600c coaE (requalified) — dephospho-CoA kinase coaE coaA (requalified) — pantothenate kinase coaA ribF (requalified) — bifunctional riboflavin kinase /FMN adenylyltransf ribF prpC (requalified) — 2-methylcitrate synthase prpC gltA2 (requalified) — citrate synthase gltA2 citA (requalified) — citrate synthase 2 citA pykA (requalified) — pyruvate kinase pykA mdh (requalified) — malate dehydrogenase mdh mez (requalified) — NAD-dependent malic enzyme mez yidC (requalified) — membrane protein insertase YidC yidC Rv3920c (family_assigned) — R3H domain-containing nucleic acid-binding protein Rv3920c rpmH (requalified) — 50S ribosomal protein L34 rpmH rho (requalified) — transcription termination factor Rho rho rplB (requalified) — 50S ribosomal protein L2 rplB Rv2970A (family_assigned) — hypothetical protein Rv2970A Rv2971 (requalified) — aldo/keto reductase Rv2971 cmk (requalified) — (d)CMP kinase cmk Rv1711 (requalified) — pseudouridine synthase Rv1711 scpB (family_assigned) — SMC-Scp complex subunit ScpB scpB scpA (requalified) — segregation/condensation protein A scpA Rv1708 (requalified) — initiation inhibitor protein Rv1708 dnaG (requalified) — DNA primase dnaG rpsL (requalified) — 30S ribosomal protein S12 rpsL rplD (requalified) — 50S ribosomal protein L4 rplD lepB (requalified) — signal peptidase I lepB rplS (requalified) — 50S ribosomal protein L19 rplS dnaN (family_assigned) — DNA polymerase III subunit beta dnaN lppK (family_assigned) — hypothetical protein lppK Rv2901c (dark) — DUF2469 domain-containing protein Rv2901c Rv1226c (family_assigned) — PH domain-containing protein Rv1226c Rv1227c (family_assigned) — PH domain-containing protein Rv1227c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.