MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2960c · 43 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv2960c (dark) — hypothetical protein Rv2960c Rv2961 (requalified) — transposase Rv2961 Rv2959c (requalified) — rhamnosyl O-methyltransferase Rv2959c Rv2958c (requalified) — PGL/p-HBAD biosynthesis glycosyltransferase Rv2958c Rv2956 (requalified) — [alpha-L-fucopyranosyl-(1->3)-alpha-L-rhamnopyrano Rv2956 Rv2954c (requalified) — [2%2C4-di-O-methyl-alpha-L-fucopyranosyl-(1->3)-al Rv2954c Rv1513 (family_assigned) — FkbM family methyltransferase Rv1513 Rv2955c (requalified) — [2-O-methyl-alpha-L-fucopyranosyl-(1->3)-alpha-L-r Rv2955c Rv2953 (requalified) — trans-acting enoyl reductase Rv2953 epiA (requalified) — GDP-L-fucose synthase epiA Rv3386 (requalified) — transposase Rv3386 vapC26 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC26 mazF4 (requalified) — type II toxin-antitoxin system toxin endoribonucle mazF4 Rv2086 (family_assigned) — hypothetical protein Rv2086 Rv0790c (family_assigned) — transglutaminase-like domain-containing protein Rv0790c PE_PGRS28 (family_assigned) — PE-PGRS family protein PE_PGRS28 PE_PGRS28 Rv2075c (family_assigned) — hypothetical protein Rv2075c vapC16 (requalified) — ribonuclease VapC16 vapC16 PPE8 (family_assigned) — PPE family protein PPE8 PPE8 PPE56 (family_assigned) — PPE family protein PPE56 PPE56 ppsB (requalified) — phthiocerol type I polyketide synthase PpsB ppsB Rv2957 (requalified) — PGL/p-HBAD biosynthesis glycosyltransferase Rv2957 hisN (requalified) — histidinol-phosphatase hisN cyp121 (requalified) — mycocyclosin synthase Cyp121 cyp121 cyp141 (requalified) — cytochrome P450 Cyp141 cyp141 iniB (requalified) — isoniazid-induced protein IniB iniB Rv1004c (family_assigned) — hypothetical protein Rv1004c PPE55 (family_assigned) — PPE family protein PPE55 PPE55 Rv2209 (requalified) — MFS transporter Rv2209 gmdA (requalified) — GDP-mannose 4%2C6-dehydratase gmdA Rv1514c (family_assigned) — glycosyltransferase family 2 protein Rv1514c Rv3727 (requalified) — FAD-dependent oxidoreductase Rv3727 Rv2305 (family_assigned) — hypothetical protein Rv2305 Rv2952 (requalified) — phthiotriol/phenolphthiotriol dimycocerosates meth Rv2952 Rv2951c (requalified) — phthiodiolone/phenolphthiodiolone dimycocerosates Rv2951c htdX (requalified) — 3-hydroxyacyl-thioester dehydratase HtdX htdX ethA (requalified) — FAD-containing monooxygenase EthA ethA echA3 (family_assigned) — crotonase/enoyl-CoA hydratase family protein echA3 Rv1254 (requalified) — acyltransferase Rv1254 gca (requalified) — GDP-mannose 4%2C6-dehydratase gca Rv1508A (family_assigned) — hypothetical protein Rv1508A rpsS (requalified) — 30S ribosomal protein S19 rpsS rpsL (requalified) — 30S ribosomal protein S12 rpsL

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.