MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2959c · 39 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv2959c (requalified) — rhamnosyl O-methyltransferase Rv2959c Rv2958c (requalified) — PGL/p-HBAD biosynthesis glycosyltransferase Rv2958c PE_PGRS28 (family_assigned) — PE-PGRS family protein PE_PGRS28 PE_PGRS28 Rv2075c (family_assigned) — hypothetical protein Rv2075c vapC16 (requalified) — ribonuclease VapC16 vapC16 PPE8 (family_assigned) — PPE family protein PPE8 PPE8 PPE56 (family_assigned) — PPE family protein PPE56 PPE56 Rv2082 (dark) — DUF5631 domain-containing protein Rv2082 Rv0104 (family_assigned) — cyclic nucleotide-binding domain-containing protei Rv0104 PPE55 (family_assigned) — PPE family protein PPE55 PPE55 PE_PGRS43 (family_assigned) — PE-PGRS family protein PE_PGRS43 PE_PGRS43 PPE54 (family_assigned) — PPE family protein PPE54 PPE54 PPE5 (family_assigned) — PPE family protein PPE5 PPE5 ppsB (requalified) — phthiocerol type I polyketide synthase PpsB ppsB Rv2957 (requalified) — PGL/p-HBAD biosynthesis glycosyltransferase Rv2957 hisN (requalified) — histidinol-phosphatase hisN cyp121 (requalified) — mycocyclosin synthase Cyp121 cyp121 cyp141 (requalified) — cytochrome P450 Cyp141 cyp141 Rv2209 (requalified) — MFS transporter Rv2209 PPE6 (family_assigned) — PPE family protein PPE6 PPE6 Rv1004c (family_assigned) — hypothetical protein Rv1004c iniB (requalified) — isoniazid-induced protein IniB iniB Rv2308 (family_assigned) — DUF433 domain-containing protein Rv2308 PPE34 (family_assigned) — PPE family protein PPE34 PPE34 cpnT (requalified) — outer membrane channel protein/necrotizing toxin g cpnT csm5 (requalified) — type III-A CRISPR-associated RAMP protein Csm5 csm5 espE (requalified) — type VII secretion system ESX-1 associated protein espE Rv2086 (family_assigned) — hypothetical protein Rv2086 PE_PGRS16 (family_assigned) — PE-PGRS family protein PE_PGRS16 PE_PGRS16 eccD4 (family_assigned) — type VII secretion system ESX-4 subunit EccD4 eccD4 Rv2083 (dark) — hypothetical protein Rv2083 Rv2305 (family_assigned) — hypothetical protein Rv2305 Rv2084 (dark) — hypothetical protein Rv2084 frdA (family_assigned) — fumarate reductase (quinol) flavoprotein subunit frdA frdB (family_assigned) — succinate dehydrogenase iron-sulfur subunit frdB frdD (family_assigned) — fumarate reductase subunit FrdD frdD PE_PGRS2 (family_assigned) — PE-PGRS family protein PE_PGRS2 PE_PGRS2 PPE21 (family_assigned) — PPE family protein PPE21 PPE21 PPE62 (family_assigned) — PPE family protein PPE62 PPE62

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.