MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2948c · 44 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
fadD22 (requalified) — p-hydroxybenzoic acid--AMP ligase FadD22 fadD22 Rv2949c (family_assigned) — chorismate pyruvate-lyase family protein Rv2949c pks15 (requalified) — polyketide synthase pks15 fadD29 (requalified) — long-chain-fatty-acid--AMP ligase FadD29 fadD29 pks1 (requalified) — polyketide synthase pks1 mas (requalified) — mycocerosate synthase mas ppsB (requalified) — phthiocerol type I polyketide synthase PpsB ppsB fadD18 (requalified) — fatty-acid--CoA ligase FadD18 fadD18 fadD17 (requalified) — long-chain-fatty-acid--CoA ligase FadD17 fadD17 papA5 (requalified) — phthiocerol/phthiodiolone dimycocerosyl transferas papA5 ppsC (requalified) — phthiocerol type I polyketide synthase PpsC ppsC rplF (requalified) — 50S ribosomal protein L6 rplF pks12 (requalified) — type I polyketide synthase pks12 entC (requalified) — isochorismate synthase entC Rv0948c (requalified) — chorismate mutase Rv0948c Rv1885c (requalified) — chorismate mutase Rv1885c pks17 (requalified) — polyketide synthase pks17 pks4 (requalified) — polyketide beta-ketoacyl synthase pks4 mbtE (requalified) — peptide synthetase mbtE fas (requalified) — fatty acid synthase fas mbtC (requalified) — polyketide synthetase MbtC mbtC mbtB (requalified) — phenyloxazoline synthase MbtB mbtB fabD (requalified) — malonyl CoA-acyl carrier protein transacylase fabD pks2 (requalified) — phthioceranic/hydroxyphthioceranic acid synthase pks2 ppsA (requalified) — phthiocerol type I polyketide synthase PpsA ppsA fadD26 (requalified) — long-chain-fatty-acid--AMP ligase FAAL26/FadD26 fadD26 ppsE (requalified) — phthiocerol type I polyketide synthase PpsE ppsE ppsD (requalified) — phthiocerol type I polyketide synthase PpsD ppsD fadD10 (requalified) — fatty-acid--CoA ligase FadD10 fadD10 fadD1 (requalified) — fatty-acid--CoA ligase FadD1 fadD1 pks5 (requalified) — sulfolipid-1 biosynthesis phthioceranic/hydroxypht pks5 fadE26 (requalified) — acyl-CoA dehydrogenase fadE26 fadE27 (family_assigned) — acyl-CoA dehydrogenase family protein fadE27 Rv3502c (requalified) — 3-oxoacyl-ACP reductase Rv3502c menE (requalified) — o-succinylbenzoate--CoA ligase menE drrB (family_assigned) — daunorubicin ABC transporter permease DrrB drrB drrC (family_assigned) — ABC transporter permease drrC drrA (family_assigned) — daunorubicin ABC transporter ATP-binding protein D drrA rpsD (requalified) — 30S ribosomal protein S4 rpsD rplW (requalified) — 50S ribosomal protein L23 rplW rpsG (requalified) — 30S ribosomal protein S7 rpsG rplS (requalified) — 50S ribosomal protein L19 rplS rpsR1 (requalified) — 30S ribosomal protein S18 rpsR1 rplB (requalified) — 50S ribosomal protein L2 rplB

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.