MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2922c · 46 genes shown · anchor scpA · open gene page → · ← back to 1 hop

Evidence: Min score 0
smc (requalified) — chromosome segregation protein SMC smc scpA (requalified) — segregation/condensation protein A scpA Rv2923c (family_assigned) — OsmC family protein Rv2923c acyP (requalified) — acylphosphatase acyP ftsY (requalified) — signal recognition particle-docking protein FtsY ftsY scpB (family_assigned) — SMC-Scp complex subunit ScpB scpB fpg (requalified) — DNA-formamidopyrimidine glycosylase fpg rnc (requalified) — ribonuclease III rnc Rv2926c (family_assigned) — hypothetical protein Rv2926c gyrB (family_assigned) — DNA topoisomerase (ATP-hydrolyzing) subunit B gyrB amt (requalified) — ammonium transporter amt sepIVA (requalified) — cell division protein SepIVA sepIVA fas (requalified) — fatty acid synthase fas Rv1708 (requalified) — initiation inhibitor protein Rv1708 cmk (requalified) — (d)CMP kinase cmk Rv1711 (requalified) — pseudouridine synthase Rv1711 engA (requalified) — ribosome biogenesis GTPase Der engA pta (requalified) — phosphate acetyltransferase pta Rv3175 (requalified) — amidase Rv3175 amiB2 (requalified) — amidase amiB2 amiA2 (requalified) — amidase amiA2 amiD (requalified) — amidase amiD amiC (requalified) — amidase amiC ffh (requalified) — signal recognition particle protein ffh secY (family_assigned) — preprotein translocase subunit SecY secY Rv3362c (family_assigned) — ATP/GTP-binding protein Rv3362c secG (family_assigned) — preprotein translocase subunit SecG secG secE1 (requalified) — preprotein translocase SecE secE1 rplW (requalified) — 50S ribosomal protein L23 rplW Rv0944 (requalified) — formamidopyrimidine-DNA glycosylase Rv0944 polA (requalified) — DNA polymerase I polA rpmA (requalified) — 50S ribosomal protein L27 rpmA rpmF (requalified) — 50S ribosomal protein L32 rpmF rpsI (requalified) — 30S ribosomal protein S9 rpsI rplP (requalified) — 50S ribosomal protein L16 rplP rplS (requalified) — 50S ribosomal protein L19 rplS rpsC (requalified) — 30S ribosomal protein S3 rpsC rplK (requalified) — 50S ribosomal protein L11 rplK rplA (requalified) — 50S ribosomal protein L1 rplA rpmI (requalified) — 50S ribosomal protein L35 rpmI gyrA (family_assigned) — DNA topoisomerase (ATP-hydrolyzing) subunit A gyrA mfpA (requalified) — pentapeptide repeat protein MfpA mfpA Rv0730 (requalified) — GCN5-like N-acetyltransferase Rv0730 recF (requalified) — DNA replication/repair protein RecF recF dnaN (family_assigned) — DNA polymerase III subunit beta dnaN Rv0004 (requalified) — DNA replication protein DciA Rv0004

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.