MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2914c · 46 genes shown · anchor pstP · open gene page → · ← back to 1 hop

Evidence: Min score 0
pknI (requalified) — serine/threonine protein kinase PknI pknI pstP (requalified) — phosphoserine/threonine phosphatase PstP pstP ffh (requalified) — signal recognition particle protein ffh Rv2915c (family_assigned) — amidohydrolase family protein Rv2915c Rv2912c (family_assigned) — TetR/AcrR family transcriptional regulator Rv2912c Rv2913c (family_assigned) — amidohydrolase family protein Rv2913c garA (requalified) — glycogen accumulation regulator GarA garA fhaB (family_assigned) — FHA domain-containing protein fhaB fhaA (requalified) — cell division-associated protein FhaA fhaA pknB (family_assigned) — Stk1 family PASTA domain-containing Ser/Thr kinase pknB Rv2917 (family_assigned) — hypothetical protein Rv2917 embR (requalified) — response regulator transcription factor EmbR embR Rv1747 (family_assigned) — ATP-binding cassette domain-containing protein Rv1747 pknA (requalified) — serine/threonine protein kinase PknA pknA fmu (requalified) — 16S rRNA m5C967 methyltransferase fmu rodA (requalified) — cell shape-determining peptidoglycan glycosyltrans rodA pbpA (requalified) — D%2CD-transpeptidase PbpA pbpA pknD (requalified) — serine/threonine protein kinase PknD pknD ftsY (requalified) — signal recognition particle-docking protein FtsY ftsY secY (family_assigned) — preprotein translocase subunit SecY secY secE1 (requalified) — preprotein translocase SecE secE1 secG (family_assigned) — preprotein translocase subunit SecG secG rplD (requalified) — 50S ribosomal protein L4 rplD yidC (requalified) — membrane protein insertase YidC yidC Rv2052c (requalified) — amidohydrolase Rv2052c Rv3830c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3830c Rv0452 (family_assigned) — TetR family transcriptional regulator Rv0452 Rv3833 (family_assigned) — helix-turn-helix transcriptional regulator Rv3833 virS (family_assigned) — AraC family transcriptional regulator virS Rv3736 (family_assigned) — AraC family transcriptional regulator Rv3736 Rv0293c (requalified) — alpha/beta fold hydrolase Rv0293c lipE (requalified) — lipase LipE lipE Rv1248c (family_assigned) — multifunctional oxoglutarate decarboxylase/oxoglut Rv1248c Rv1828 (family_assigned) — MerR family transcriptional regulator Rv1828 gdh (requalified) — NAD-glutamate dehydrogenase gdh pknG (requalified) — serine/threonine protein kinase PknG pknG Rv1829 (family_assigned) — hypothetical protein Rv1829 murJ (requalified) — murein biosynthesis integral membrane protein MurJ murJ dinG (requalified) — ATP-dependent helicase DinG dinG rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ polA (requalified) — DNA polymerase I polA Rv2033c (family_assigned) — DUF3097 domain-containing protein Rv2033c Rv0894 (family_assigned) — hypothetical protein Rv0894 Rv2488c (family_assigned) — LuxR family transcriptional regulator Rv2488c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.