MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2911 · 46 genes shown · anchor trmD · open gene page → · ← back to 1 hop

Evidence: Min score 0
dacB2 (family_assigned) — penicillin-binding protein DacB2 dacB2 dacB1 (requalified) — D-alanyl-D-alanine carboxypeptidase DacB1 dacB1 dacB (requalified) — D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-ala dacB rodA (requalified) — cell shape-determining peptidoglycan glycosyltrans rodA ponA1 (requalified) — bifunctional penicillin-insensitive transglycosyla ponA1 ldtB (requalified) — L%2CD-transpeptidase LdtMt2 ldtB Rv2910c (family_assigned) — hypothetical protein Rv2910c Rv0192 (family_assigned) — hypothetical protein Rv0192 trmD (requalified) — tRNA (guanosine(37)-N1)-methyltransferase TrmD trmD Rv2908c (family_assigned) — RNA-binding protein Rv2908c rpsP (requalified) — 30S ribosomal protein S16 rpsP rimM (requalified) — ribosome maturation factor RimM rimM ftsW (family_assigned) — putative lipid II flippase FtsW ftsW nagA (requalified) — N-acetylglucosamine-6-phosphate deacetylase nagA sugI (requalified) — sugar-transport integral membrane protein SugI sugI Rv3329 (requalified) — aminotransferase Rv3329 Rv3626c (requalified) — zinc-dependent metalloprotease Rv3626c mesJ (requalified) — tRNA lysidine(34) synthetase TilS mesJ hpt (requalified) — hypoxanthine phosphoribosyltransferase hpt ppa (requalified) — inorganic diphosphatase ppa pbpA (requalified) — D%2CD-transpeptidase PbpA pbpA pknB (family_assigned) — Stk1 family PASTA domain-containing Ser/Thr kinase pknB pknA (requalified) — serine/threonine protein kinase PknA pknA pstP (requalified) — phosphoserine/threonine phosphatase PstP pstP pbpB (requalified) — D%2CD-transpeptidase PbpB pbpB fhaB (family_assigned) — FHA domain-containing protein fhaB Rv0051 (family_assigned) — glycosyltransferase family 87 protein Rv0051 rpsF (requalified) — 30S ribosomal protein S6 rpsF Rv0052 (family_assigned) — hypothetical protein Rv0052 wag31 (requalified) — cell wall synthesis protein Wag31 wag31 Rv3015c (requalified) — methionine synthase Rv3015c Rv2413c (family_assigned) — DNA polymerase III subunit delta Rv2413c glfT2 (requalified) — galactofuranosyl transferase GlfT2 glfT2 aftC (requalified) — arabinofuranan 3-O-arabinosyltransferase aftC Rv1874 (family_assigned) — hypothetical protein Rv1874 Rv0310c (family_assigned) — nuclear transport factor 2 family protein Rv0310c Rv0293c (requalified) — alpha/beta fold hydrolase Rv0293c Rv0191 (family_assigned) — Rv0191 family MFS efflux transporter Rv0191 ponA2 (requalified) — bifunctional penicillin-insensitive transglycosyla ponA2 atpH (family_assigned) — F0F1 ATP synthase subunit B/delta atpH rplS (requalified) — 50S ribosomal protein L19 rplS rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA nusA (requalified) — transcription termination factor NusA nusA Rv3920c (family_assigned) — R3H domain-containing nucleic acid-binding protein Rv3920c rpsI (requalified) — 30S ribosomal protein S9 rpsI rpmG2 (requalified) — 50S ribosomal protein L33 rpmG2

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.