MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2905 · 46 genes shown · anchor eccD3 · open gene page → · ← back to 1 hop

Evidence: Min score 0
lppW (family_assigned) — hypothetical protein lppW Rv1836c (family_assigned) — substrate-binding domain-containing protein Rv1836c Rv3906c (requalified) — pullulanase Rv3906c eccD3 (family_assigned) — type VII secretion system ESX-3 subunit EccD3 eccD3 mctB (requalified) — copper transporter MctB mctB Rv0518 (family_assigned) — SGNH/GDSL hydrolase family protein Rv0518 Rv0990c (family_assigned) — SAF domain-containing protein Rv0990c Rv0472c (family_assigned) — TetR/AcrR family transcriptional regulator Rv0472c Rv0499 (family_assigned) — thioesterase family protein Rv0499 Rv1118c (requalified) — hypothetical protein Rv1118c Rv1639c (family_assigned) — alpha/beta hydrolase family protein Rv1639c Rv3587c (family_assigned) — hypothetical protein Rv3587c pirG (requalified) — exported repetitive protein pirG glcB (requalified) — malate synthase G glcB Rv1835c (family_assigned) — CocE/NonD family hydrolase Rv1835c Rv1324 (requalified) — co-chaperone YbbN Rv1324 ubiA (requalified) — decaprenyl-phosphate phosphoribosyltransferase ubiA Rv1125 (family_assigned) — WS/DGAT domain-containing protein Rv1125 pcnA (requalified) — poly(A) polymerase PcnA pcnA murJ (requalified) — murein biosynthesis integral membrane protein MurJ murJ Rv3909 (dark) — hypothetical protein Rv3909 ttfA (requalified) — trehalose monomycolate transport factor TtfA ttfA Rv0513 (family_assigned) — DUF3093 domain-containing protein Rv0513 eccB3 (family_assigned) — type VII secretion system ESX-3 subunit EccB3 eccB3 eccC3 (family_assigned) — type VII secretion system ESX-3 FtsK/SpoIIIE famil eccC3 eccE3 (family_assigned) — type VII secretion system ESX-3 subunit EccE3 eccE3 mycP3 (requalified) — type VII secretion system ESX-3 serine protease my mycP3 espG3 (requalified) — type VII secretion system ESX-3 associated protein espG3 eccB5 (family_assigned) — type VII secretion system ESX-5 subunit EccB5 eccB5 steA (family_assigned) — putative cytokinetic ring protein SteA steA xerD (requalified) — site-specific tyrosine recombinase XerD xerD recN (requalified) — DNA repair protein RecN recN pyrG (requalified) — CTP synthase pyrG Rv1700 (requalified) — ADP-ribose diphosphatase Rv1700 ppnK (requalified) — NAD kinase ppnK Rv0517 (requalified) — acyltransferase Rv0517 Rv3707c (requalified) — hypothetical protein Rv3707c Rv0273c (family_assigned) — TetR/AcrR family transcriptional regulator Rv0273c Rv1364c (family_assigned) — sigma factor regulatory protein Rv1364c Rv3657c (family_assigned) — membrane protein Rv3657c Rv3658c (family_assigned) — type II secretion system F family protein Rv3658c ssd (requalified) — septum site-determining protein Ssd ssd Rv3655c (requalified) — apoptosis inhibitor Rv3655c Rv0991c (family_assigned) — FmdB family zinc ribbon protein Rv0991c Rv0471c (requalified) — 1%2C4-dihydroxy-2-naphthoate prenyltransferase Rv0471c Rv0470A (family_assigned) — hypothetical protein Rv0470A

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.