MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2903c · 46 genes shown · anchor rnhB · open gene page → · ← back to 1 hop

Evidence: Min score 0
lepB (requalified) — signal peptidase I lepB rnhB (requalified) — ribonuclease HII rnhB rplS (requalified) — 50S ribosomal protein L19 rplS Rv2901c (dark) — DUF2469 domain-containing protein Rv2901c atpE (family_assigned) — F0F1 ATP synthase subunit C atpE rpmD (requalified) — 50S ribosomal protein L30 rpmD ligD (requalified) — ATP-dependent DNA ligase ligD ligB (requalified) — ATP-dependent DNA ligase ligB ligC (requalified) — ATP-dependent DNA ligase ligC lepA (requalified) — translation elongation factor 4 lepA rip (requalified) — zinc metalloprotease Rip rip gltS (requalified) — glutamate--tRNA ligase gltS yidC (requalified) — membrane protein insertase YidC yidC dnaN (family_assigned) — DNA polymerase III subunit beta dnaN lppK (family_assigned) — hypothetical protein lppK coaE (requalified) — dephospho-CoA kinase coaE rpsR1 (requalified) — 30S ribosomal protein S18 rpsR1 rplB (requalified) — 50S ribosomal protein L2 rplB rpsH (requalified) — 30S ribosomal protein S8 rpsH rpmH (requalified) — 50S ribosomal protein L34 rpmH rpsF (requalified) — 30S ribosomal protein S6 rpsF rplP (requalified) — 50S ribosomal protein L16 rplP whiB1 (family_assigned) — transcriptional regulator WhiB1 whiB1 whiB2 (family_assigned) — transcriptional regulator WhiB2 whiB2 rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ atpB (family_assigned) — F0F1 ATP synthase subunit A atpB atpH (family_assigned) — F0F1 ATP synthase subunit B/delta atpH atpC (family_assigned) — F0F1 ATP synthase subunit epsilon atpC atpF (family_assigned) — F0F1 ATP synthase subunit B atpF atpD (family_assigned) — F0F1 ATP synthase subunit beta atpD atpA (family_assigned) — F0F1 ATP synthase subunit alpha atpA rpsG (requalified) — 30S ribosomal protein S7 rpsG rpsD (requalified) — 30S ribosomal protein S4 rpsD rplW (requalified) — 50S ribosomal protein L23 rplW rpsS (requalified) — 30S ribosomal protein S19 rpsS Rv0939 (family_assigned) — fumarylacetoacetate hydrolase family protein Rv0939 mku (requalified) — Ku protein mku polA (requalified) — DNA polymerase I polA Rv2090 (requalified) — 5'-3' exonuclease Rv2090 ligA (requalified) — NAD-dependent DNA ligase LigA ligA fadE22 (requalified) — acyl-CoA dehydrogenase fadE22 ligD (requalified) — non-homologous end-joining DNA ligase ligD Rv0269c (requalified) — DNA polymerase domain-containing protein Rv0269c rplM (requalified) — 50S ribosomal protein L13 rplM rpsB (requalified) — 30S ribosomal protein S2 rpsB rpsP (requalified) — 30S ribosomal protein S16 rpsP

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.