MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2899c · 46 genes shown · anchor fdhF · open gene page → · ← back to 1 hop

Evidence: Min score 0
fdhD (requalified) — formate dehydrogenase accessory sulfurtransferase fdhD fdhF (family_assigned) — FdhF/YdeP family oxidoreductase fdhF Rv2898c (family_assigned) — YraN family protein Rv2898c Rv2897c (family_assigned) — YifB family Mg chelatase-like AAA ATPase Rv2897c Rv2901c (dark) — DUF2469 domain-containing protein Rv2901c hycE (family_assigned) — NADH-quinone oxidoreductase subunit C hycE dprA (requalified) — DNA-processing protein DprA dprA rnhB (requalified) — ribonuclease HII rnhB lepB (requalified) — signal peptidase I lepB moaA2 (requalified) — GTP 3'%2C8-cyclase MoaA moaA2 mobA (requalified) — molybdenum cofactor guanylyltransferase mobA nuoF (family_assigned) — NADH-quinone oxidoreductase subunit NuoF nuoF moaA1 (requalified) — cyclic pyranopterin monophosphate synthase moaA1 qcrC (requalified) — cytochrome c qcrC tuf (requalified) — elongation factor Tu tuf viuB (requalified) — siderophore-interacting protein viuB Rv1364c (family_assigned) — sigma factor regulatory protein Rv1364c Rv1354c (requalified) — bifunctional diguanylate cyclase/phosphodiesterase Rv1354c Rv2414c (family_assigned) — ComEC/Rec2 family competence protein Rv2414c whiB1 (family_assigned) — transcriptional regulator WhiB1 whiB1 whiB2 (family_assigned) — transcriptional regulator WhiB2 whiB2 rplS (requalified) — 50S ribosomal protein L19 rplS rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ Rv0083 (requalified) — oxidoreductase Rv0083 Rv0082 (family_assigned) — NADH-quinone oxidoreductase subunit B family prote Rv0082 hycQ (requalified) — hydrogenase HycQ hycQ hycD (family_assigned) — respiratory chain complex I subunit 1 family prote hycD nuoI (family_assigned) — NADH-quinone oxidoreductase subunit NuoI nuoI hycP (family_assigned) — hypothetical protein hycP Rv2551c (family_assigned) — A24 family peptidase Rv2551c Rv3242c (family_assigned) — ComF family protein Rv3242c dnaN (family_assigned) — DNA polymerase III subunit beta dnaN lppK (family_assigned) — hypothetical protein lppK coaE (requalified) — dephospho-CoA kinase coaE atpE (family_assigned) — F0F1 ATP synthase subunit C atpE rpmD (requalified) — 50S ribosomal protein L30 rpmD ligD (requalified) — ATP-dependent DNA ligase ligD moaC2 (requalified) — cyclic pyranopterin monophosphate synthase MoaC moaC2 moaC3 (requalified) — cyclic pyranopterin monophosphate synthase MoaC moaC3 moaC1 (requalified) — cyclic pyranopterin monophosphate synthase accesso moaC1 moaD2 (family_assigned) — molybdopterin synthase subunit MoaD2 moaD2 moaE2 (family_assigned) — molybdopterin synthase subunit MoaE2 moaE2 Rv2454c (family_assigned) — 2-oxoacid:ferredoxin oxidoreductase subunit beta Rv2454c moeA2 (requalified) — molybdopterin molybdenumtransferase moeA2 moeA1 (requalified) — molybdopterin molybdenumtransferase 1 moeA1 Rv0371c (family_assigned) — NTP transferase domain-containing protein Rv0371c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.