MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2896c · 46 genes shown · anchor viuB · open gene page → · ← back to 1 hop

Evidence: Min score 0
dprA (requalified) — DNA-processing protein DprA dprA Rv2897c (family_assigned) — YifB family Mg chelatase-like AAA ATPase Rv2897c Rv2898c (family_assigned) — YraN family protein Rv2898c Rv1364c (family_assigned) — sigma factor regulatory protein Rv1364c viuB (requalified) — siderophore-interacting protein viuB Rv2551c (family_assigned) — A24 family peptidase Rv2551c Rv3242c (family_assigned) — ComF family protein Rv3242c Rv1354c (requalified) — bifunctional diguanylate cyclase/phosphodiesterase Rv1354c xerC (requalified) — tyrosine recombinase XerC xerC recA (requalified) — intein-containing recombinase RecA recA Rv2414c (family_assigned) — ComEC/Rec2 family competence protein Rv2414c fdhF (family_assigned) — FdhF/YdeP family oxidoreductase fdhF fdhD (requalified) — formate dehydrogenase accessory sulfurtransferase fdhD fbiC (requalified) — bifunctional FO biosynthesis protein CofGH fbiC rsfA (requalified) — anti-sigma-F factor antagonist RsfA rsfA rsfB (family_assigned) — STAS domain-containing protein rsfB Rv1904 (requalified) — anti-sigma factor antagonist Rv1904 Rv2638 (requalified) — anti-sigma factor antagonist Rv2638 mbtB (requalified) — phenyloxazoline synthase MbtB mbtB Rv0265c (family_assigned) — iron ABC transporter substrate-binding lipoprotein Rv0265c aroE (requalified) — shikimate dehydrogenase aroE mltG (requalified) — endolytic transglycosylase MltG mltG ruvX (requalified) — Holliday junction resolvase RuvX ruvX alaS (requalified) — alanine--tRNA ligase alaS Rv2556c (requalified) — secondary thiamine-phosphate synthase enzyme YjbQ Rv2556c tyrA (requalified) — prephenate dehydrogenase TyrA tyrA apt (requalified) — adenine phosphoribosyltransferase apt hemY (requalified) — protoporphyrinogen oxidase hemY nagA (requalified) — N-acetylglucosamine-6-phosphate deacetylase nagA moeY (family_assigned) — Rv1355c family protein moeY Rv1353c (family_assigned) — TetR/AcrR family transcriptional regulator C-termi Rv1353c Rv1356c (requalified) — hypothetical protein Rv1356c Rv1358 (family_assigned) — LuxR C-terminal-related transcriptional regulator Rv1358 Rv1357c (requalified) — cyclic diguanylate phosphodiesterase Rv1357c Rv2646 (requalified) — tyrosine-type recombinase/integrase Rv2646 whiA (family_assigned) — DNA-binding protein WhiA whiA recX (requalified) — recombination regulator RecX recX polA (requalified) — DNA polymerase I polA lexA (requalified) — transcriptional repressor LexA lexA radA (requalified) — DNA repair protein RadA radA Rv2090 (requalified) — 5'-3' exonuclease Rv2090 dnaN (family_assigned) — DNA polymerase III subunit beta dnaN Rv2415c (family_assigned) — ComEA family DNA-binding protein Rv2415c Rv2413c (family_assigned) — DNA polymerase III subunit delta Rv2413c qcrC (requalified) — cytochrome c qcrC tuf (requalified) — elongation factor Tu tuf

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.