MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2891 · 45 genes shown · anchor amiC · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv2891 (family_assigned) — hypothetical protein Rv2891 eccC4 (family_assigned) — type VII secretion system ESX-4 FtsK/SpoIIIE famil eccC4 Rv0745 (family_assigned) — hypothetical protein Rv0745 Rv3446c (family_assigned) — type VII secretion-associated protein Rv3446c mycP4 (requalified) — type VII secretion system ESX-4 serine protease my mycP4 amiC (requalified) — amidase amiC rpsB (requalified) — 30S ribosomal protein S2 rpsB tsf (requalified) — translation elongation factor Ts tsf Rv0371c (family_assigned) — NTP transferase domain-containing protein Rv0371c Rv3242c (family_assigned) — ComF family protein Rv3242c xerC (requalified) — tyrosine recombinase XerC xerC Rv0877 (dark) — DUF3027 domain-containing protein Rv0877 Rv2901c (dark) — DUF2469 domain-containing protein Rv2901c eccD4 (family_assigned) — type VII secretion system ESX-4 subunit EccD4 eccD4 esxU (requalified) — type VII secretion system ESX-4 protein EsxU esxU eccB3 (family_assigned) — type VII secretion system ESX-3 subunit EccB3 eccB3 eccB5 (family_assigned) — type VII secretion system ESX-5 subunit EccB5 eccB5 Rv0648 (requalified) — alpha-mannosidase Rv0648 galK (requalified) — galactokinase galK htpG (requalified) — molecular chaperone HtpG htpG grpE (requalified) — nucleotide exchange factor GrpE grpE dnaJ2 (requalified) — molecular chaperone DnaJ dnaJ2 whiB5 (family_assigned) — transcriptional regulator WhiB5 whiB5 esxT (family_assigned) — WXG100 family type VII secretion target esxT Rv3196 (family_assigned) — hypothetical protein Rv3196 gatB (family_assigned) — Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subun gatB acyP (requalified) — acylphosphatase acyP Rv3551 (family_assigned) — CoA transferase subunit A Rv3551 gatC (family_assigned) — Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subun gatC rpsR2 (requalified) — 30S ribosomal protein S18 rpsR2 rpsG (requalified) — 30S ribosomal protein S7 rpsG rpsH (requalified) — 30S ribosomal protein S8 rpsH rpsF (requalified) — 30S ribosomal protein S6 rpsF rpsC (requalified) — 30S ribosomal protein S3 rpsC rpsI (requalified) — 30S ribosomal protein S9 rpsI tuf (requalified) — elongation factor Tu tuf atpH (family_assigned) — F0F1 ATP synthase subunit B/delta atpH frr (requalified) — ribosome recycling factor frr rplM (requalified) — 50S ribosomal protein L13 rplM Rv0372c (family_assigned) — XdhC family protein Rv0372c Rv0374c (family_assigned) — (2Fe-2S)-binding protein Rv0374c Rv0375c (family_assigned) — carbon monoxyde dehydrogenase medium subunit Rv0375c Rv0376c (family_assigned) — hypothetical protein Rv0376c Rv0373c (family_assigned) — aerobic carbon-monoxide dehydrogenase large subuni Rv0373c moeA1 (requalified) — molybdopterin molybdenumtransferase 1 moeA1

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.