MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2880c · 46 genes shown · anchor rlmN · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv2880c (family_assigned) — Conserved hypothetical protein Rv2880c Rv2879c (family_assigned) — Conserved hypothetical protein Rv2879c fmu (requalified) — 16S rRNA m5C967 methyltransferase fmu cdsA (requalified) — phosphatidate cytidylyltransferase cdsA frr (requalified) — ribosome recycling factor frr miaB (requalified) — tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiot miaB Rv2877c (family_assigned) — integral membrane protein Rv2877c pyrH (requalified) — UMP kinase pyrH hemN (requalified) — oxygen-independent coproporphyrinogen III oxidase hemN mpt53 (requalified) — protein disulfide oxidoreductase mpt53 Rv3404c (requalified) — dTDP-4-amino-4%2C6-dideoxyglucose formyltransferas Rv3404c fmt (requalified) — methionyl-tRNA formyltransferase fmt priA (family_assigned) — primosomal protein N' priA pstP (requalified) — phosphoserine/threonine phosphatase PstP pstP rplJ (requalified) — 50S ribosomal protein L10 rplJ rpsJ (requalified) — 30S ribosomal protein S10 rpsJ ligA (requalified) — NAD-dependent DNA ligase LigA ligA pgsA3 (requalified) — CDP-diacylglycerol--glycerol-3-phosphate 3-phospha pgsA3 pssA (requalified) — CDP-diacylglycerol--serine O-phosphatidyltransfera pssA pgsA1 (requalified) — CDP-diacylglycerol--inositol 3-phosphatidyltransfe pgsA1 Rv2182c (family_assigned) — lysophospholipid acyltransferase family protein Rv2182c Rv2252 (requalified) — diacylglycerol kinase Rv2252 pgsA2 (family_assigned) — CDP-alcohol phosphatidyltransferase family protein pgsA2 rpsB (requalified) — 30S ribosomal protein S2 rpsB rplM (requalified) — 50S ribosomal protein L13 rplM rplT (requalified) — 50S ribosomal protein L20 rplT rplQ (requalified) — 50S ribosomal protein L17 rplQ rpsO (requalified) — 30S ribosomal protein S15 rpsO rplP (requalified) — 50S ribosomal protein L16 rplP Rv2732c (family_assigned) — hypothetical protein Rv2732c miaA (requalified) — tRNA (adenosine(37)-N6)-dimethylallyltransferase M miaA gpsI (requalified) — polyribonucleotide nucleotidyltransferase gpsI rphA (requalified) — ribonuclease PH rphA dsbF (requalified) — protein disulfide oxidoreductase dsbF Rv3779 (family_assigned) — DUF6541 family protein Rv3779 upp (requalified) — uracil phosphoribosyltransferase upp atpH (family_assigned) — F0F1 ATP synthase subunit B/delta atpH ndkA (requalified) — nucleoside-diphosphate kinase ndkA pyrR (family_assigned) — bifunctional pyr operon transcriptional regulator/ pyrR tsf (requalified) — translation elongation factor Ts tsf rpfD (requalified) — resuscitation-promoting factor protein RpfD rpfD Rv2390c (family_assigned) — hypothetical protein Rv2390c hemE (requalified) — uroporphyrinogen decarboxylase hemE gltB (family_assigned) — glutamate synthase large subunit gltB ahpC (requalified) — peroxiredoxin AhpC ahpC msrA (requalified) — peptide-methionine (S)-S-oxide reductase MsrA msrA

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.