MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2872 · 46 genes shown · anchor vapB43 · open gene page → · ← back to 1 hop

Evidence: Min score 0
vapC43 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC43 vapB43 (family_assigned) — ribbon-helix-helix domain-containing protein vapB43 mpt83 (requalified) — cell surface glycolipoprotein Mpt83 mpt83 dxr (requalified) — 1-deoxy-D-xylulose-5-phosphate reductoisomerase dxr rip (requalified) — zinc metalloprotease Rip rip vapC4 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC4 vapB31 (family_assigned) — ribbon-helix-helix protein%2C CopG family vapB31 gcpE (requalified) — flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-e gcpE vapC12 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC12 vapB5 (family_assigned) — type II toxin-antitoxin system Phd/YefM family ant vapB5 vapC9 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC9 vapC19 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC19 Rv2867c (family_assigned) — GNAT family N-acetyltransferase Rv2867c vapC37 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC37 vapC48 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC48 nuoD (family_assigned) — NADH dehydrogenase (quinone) subunit D nuoD dipZ (requalified) — integral membrane C-type cytochrome biogenesis pro dipZ ispD (requalified) — 2-C-methyl-D-erythritol 4-phosphate cytidylyltrans ispD dxs1 (requalified) — 1-deoxy-D-xylulose 5-phosphate synthase dxs1 dxs2 (requalified) — 1-deoxy-D-xylulose-5-phosphate synthase dxs2 cdsA (requalified) — phosphatidate cytidylyltransferase cdsA Rv2361c (requalified) — decaprenyl diphosphate synthase Rv2361c vapB4 (requalified) — type II toxin-antitoxin system antitoxin VapB4 vapB4 vapC31 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC31 Rv0597c (family_assigned) — ATP-binding protein Rv0597c Rv3479 (requalified) — transmembrane protein Rv3479 vapC25 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC25 PE_PGRS10 (family_assigned) — PE-PGRS family protein PE_PGRS10 PE_PGRS10 vapC33 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC33 lytB2 (requalified) — 4-hydroxy-3-methylbut-2-enyl diphosphate reductase lytB2 ispF (requalified) — 2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate syn ispF Rv3382c (requalified) — 4-hydroxy-3-methylbut-2-enyl diphosphate reductase Rv3382c vapB12 (requalified) — antitoxin vapB12 Rv3098A (family_assigned) — PemK-like protein Rv3098A vapC46 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC46 vapC35 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC35 vapB47 (requalified) — antitoxin VapB47 vapB47 mazE9 (requalified) — antitoxin MazE9 mazE9 vapC5 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC5 vapC8 (family_assigned) — PIN domain-containing protein vapC8 vapC47 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC47 vapB9 (requalified) — antitoxin VapB9 vapB9 vapC3 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC3 Rv0959 (family_assigned) — VWA domain-containing protein Rv0959 Rv0958 (family_assigned) — ATP-binding protein Rv0958 vapB19 (family_assigned) — CopG family transcriptional regulator vapB19

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.