MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2871 · 43 genes shown · anchor vapC43 · open gene page → · ← back to 1 hop

Evidence: Min score 0
vapB43 (family_assigned) — ribbon-helix-helix domain-containing protein vapB43 vapC43 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC43 vapC37 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC37 vapC48 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC48 mpt83 (requalified) — cell surface glycolipoprotein Mpt83 mpt83 dxr (requalified) — 1-deoxy-D-xylulose-5-phosphate reductoisomerase dxr rip (requalified) — zinc metalloprotease Rip rip vapC31 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC31 vapC25 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC25 gcpE (requalified) — flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-e gcpE vapC33 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC33 Rv2867c (family_assigned) — GNAT family N-acetyltransferase Rv2867c vapC29 (requalified) — type II toxin-antitoxin system ribonuclease VapC29 vapC29 vapC4 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC4 vapB31 (family_assigned) — ribbon-helix-helix protein%2C CopG family vapB31 vapB37 (requalified) — antitoxin vapB37 vapB5 (family_assigned) — type II toxin-antitoxin system Phd/YefM family ant vapB5 vapC12 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC12 vapB48 (requalified) — antitoxin VapB48 vapB48 glpK (requalified) — glycerol kinase GlpK glpK Rv3698 (family_assigned) — hypothetical protein Rv3698 nuoD (family_assigned) — NADH dehydrogenase (quinone) subunit D nuoD dipZ (requalified) — integral membrane C-type cytochrome biogenesis pro dipZ ispD (requalified) — 2-C-methyl-D-erythritol 4-phosphate cytidylyltrans ispD dxs1 (requalified) — 1-deoxy-D-xylulose 5-phosphate synthase dxs1 dxs2 (requalified) — 1-deoxy-D-xylulose-5-phosphate synthase dxs2 cdsA (requalified) — phosphatidate cytidylyltransferase cdsA Rv2361c (requalified) — decaprenyl diphosphate synthase Rv2361c Rv0278c (family_assigned) — PE-PGRS family protein PE_PGRS3 Rv0278c lytB2 (requalified) — 4-hydroxy-3-methylbut-2-enyl diphosphate reductase lytB2 ispF (requalified) — 2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate syn ispF Rv3382c (requalified) — 4-hydroxy-3-methylbut-2-enyl diphosphate reductase Rv3382c vapB33 (requalified) — type II toxin-antitoxin system antitoxin VapB33 vapB33 mdh (requalified) — malate dehydrogenase mdh mpa (requalified) — proteasome ATPase mpa Rv1488 (family_assigned) — SPFH domain-containing protein Rv1488 Rv2239c (family_assigned) — hypothetical protein Rv2239c vapB29 (requalified) — antitoxin VapB29 vapB29 Rv0616c (dark) — Hypothetical protein Rv0616c galTa (family_assigned) — Probable galactose-1-phosphate uridylyltransferase galTa galTb (family_assigned) — Probable galactose-1-phosphate uridylyltransferase galTb Rv2018 (family_assigned) — DUF433 domain-containing protein Rv2018 galK (requalified) — galactokinase galK

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.