MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2869c · 46 genes shown · anchor dxr · open gene page → · ← back to 1 hop

Evidence: Min score 0
rip (requalified) — zinc metalloprotease Rip rip dxr (requalified) — 1-deoxy-D-xylulose-5-phosphate reductoisomerase dxr gcpE (requalified) — flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-e gcpE Rv2867c (family_assigned) — GNAT family N-acetyltransferase Rv2867c cdsA (requalified) — phosphatidate cytidylyltransferase cdsA mpt83 (requalified) — cell surface glycolipoprotein Mpt83 mpt83 Rv2361c (requalified) — decaprenyl diphosphate synthase Rv2361c gltB (family_assigned) — glutamate synthase large subunit gltB Rv1086 (family_assigned) — undecaprenyl diphosphate synthase family protein Rv1086 Rv1087A (family_assigned) — Conserved hypothetical protein Rv1087A lepB (requalified) — signal peptidase I lepB fmu (requalified) — 16S rRNA m5C967 methyltransferase fmu Rv2864c (family_assigned) — penicillin-binding protein Rv2864c ispD (requalified) — 2-C-methyl-D-erythritol 4-phosphate cytidylyltrans ispD dxs1 (requalified) — 1-deoxy-D-xylulose 5-phosphate synthase dxs1 dxs2 (requalified) — 1-deoxy-D-xylulose-5-phosphate synthase dxs2 lytB2 (requalified) — 4-hydroxy-3-methylbut-2-enyl diphosphate reductase lytB2 ispF (requalified) — 2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate syn ispF Rv3382c (requalified) — 4-hydroxy-3-methylbut-2-enyl diphosphate reductase Rv3382c mpa (requalified) — proteasome ATPase mpa Rv1488 (family_assigned) — SPFH domain-containing protein Rv1488 Rv2239c (family_assigned) — hypothetical protein Rv2239c pgsA3 (requalified) — CDP-diacylglycerol--glycerol-3-phosphate 3-phospha pgsA3 pssA (requalified) — CDP-diacylglycerol--serine O-phosphatidyltransfera pssA pgsA1 (requalified) — CDP-diacylglycerol--inositol 3-phosphatidyltransfe pgsA1 Rv2182c (family_assigned) — lysophospholipid acyltransferase family protein Rv2182c Rv2252 (requalified) — diacylglycerol kinase Rv2252 pgsA2 (family_assigned) — CDP-alcohol phosphatidyltransferase family protein pgsA2 nuoD (family_assigned) — NADH dehydrogenase (quinone) subunit D nuoD dipZ (requalified) — integral membrane C-type cytochrome biogenesis pro dipZ vapC43 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC43 vapB43 (family_assigned) — ribbon-helix-helix domain-containing protein vapB43 Rv2360c (family_assigned) — hypothetical protein Rv2360c recO (requalified) — DNA repair protein RecO recO amiA2 (requalified) — amidase amiA2 gltD (family_assigned) — glutamate synthase subunit beta gltD fprA (requalified) — ferredoxin--NADP(+) reductase FprA fprA fadH (requalified) — NADPH-dependent 2%2C4-dienoyl-CoA reductase fadH fprB (requalified) — FAD-dependent oxidoreductase fprB carB (family_assigned) — carbamoyl-phosphate synthase large subunit carB glnA1 (requalified) — type I glutamate--ammonia ligase glnA1 idsA2 (requalified) — bifunctional (2E%2C6E)-farnesyl/geranyl diphosphat idsA2 idsA1 (requalified) — multifunctional dimethylallyltransferase/geranyltr idsA1 idsB (family_assigned) — polyprenyl synthetase family protein idsB idi (requalified) — isopentenyl-diphosphate Delta-isomerase idi proS (requalified) — proline--tRNA ligase proS

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.