MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2868c · 40 genes shown · anchor lytB2 · open gene page → · ← back to 1 hop

Evidence: Min score 0
gcpE (requalified) — flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-e gcpE lytB2 (requalified) — 4-hydroxy-3-methylbut-2-enyl diphosphate reductase lytB2 ispF (requalified) — 2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate syn ispF Rv3382c (requalified) — 4-hydroxy-3-methylbut-2-enyl diphosphate reductase Rv3382c dxr (requalified) — 1-deoxy-D-xylulose-5-phosphate reductoisomerase dxr Rv2867c (family_assigned) — GNAT family N-acetyltransferase Rv2867c rip (requalified) — zinc metalloprotease Rip rip dxs1 (requalified) — 1-deoxy-D-xylulose 5-phosphate synthase dxs1 dxs2 (requalified) — 1-deoxy-D-xylulose-5-phosphate synthase dxs2 ispD (requalified) — 2-C-methyl-D-erythritol 4-phosphate cytidylyltrans ispD ispE (requalified) — 4-diphosphocytidyl-2C-methyl-D-erythritol kinase ispE hisS (requalified) — histidine--tRNA ligase hisS Rv2864c (family_assigned) — penicillin-binding protein Rv2864c rpsA (requalified) — 30S ribosomal protein S1 rpsA idsA2 (requalified) — bifunctional (2E%2C6E)-farnesyl/geranyl diphosphat idsA2 idsA1 (requalified) — multifunctional dimethylallyltransferase/geranyltr idsA1 idsB (family_assigned) — polyprenyl synthetase family protein idsB carD (requalified) — RNA polymerase-binding transcription factor CarD carD rlmB (requalified) — 23S rRNA (guanosine(2251)-2'-O)-methyltransferase rlmB cysS1 (requalified) — cysteine--tRNA ligase cysS1 mpa (requalified) — proteasome ATPase mpa Rv1488 (family_assigned) — SPFH domain-containing protein Rv1488 Rv2239c (family_assigned) — hypothetical protein Rv2239c cdsA (requalified) — phosphatidate cytidylyltransferase cdsA mpt83 (requalified) — cell surface glycolipoprotein Mpt83 mpt83 Rv2361c (requalified) — decaprenyl diphosphate synthase Rv2361c thiG (requalified) — thiazole synthase thiG Rv3378c (requalified) — diterpene synthase Rv3378c Rv3377c (requalified) — type B diterpene cyclase Rv3377c ksgA (requalified) — 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-d ksgA Rv2581c (requalified) — MBL fold metallo-hydrolase Rv2581c aspS (requalified) — aspartate--tRNA ligase aspS hisG (requalified) — ATP phosphoribosyltransferase hisG valS (requalified) — valine--tRNA ligase valS ppiB (requalified) — peptidyl-prolyl cis-trans isomerase B ppiB ftsQ (requalified) — cell division protein FtsQ ftsQ ftsW (family_assigned) — putative lipid II flippase FtsW ftsW ponA2 (requalified) — bifunctional penicillin-insensitive transglycosyla ponA2 rodA (requalified) — cell shape-determining peptidoglycan glycosyltrans rodA Rv2091c (family_assigned) — DUF4333 domain-containing protein Rv2091c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.