MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2863 · 46 genes shown · anchor vapB23 · open gene page → · ← back to 1 hop

Evidence: Min score 0
vapC23 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC23 vapB23 (requalified) — antitoxin VapB23 vapB23 Rv2862c (family_assigned) — DUF1707 domain-containing protein Rv2862c mapB (requalified) — methionine aminopeptidase mapB vapB31 (family_assigned) — ribbon-helix-helix protein%2C CopG family vapB31 vapB43 (family_assigned) — ribbon-helix-helix domain-containing protein vapB43 vapB29 (requalified) — antitoxin VapB29 vapB29 Rv3181c (family_assigned) — type II toxin-antitoxin system Phd/YefM family ant Rv3181c vapB4 (requalified) — type II toxin-antitoxin system antitoxin VapB4 vapB4 vapC19 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC19 vapC21 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC21 vapC30 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC30 vapC7 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC7 vapB28 (family_assigned) — type II toxin-antitoxin system VapB family antitox vapB28 vapB30 (requalified) — type II toxin-antitoxin system antitoxin VapB30 vapB30 vapB44 (family_assigned) — CopG family transcriptional regulator vapB44 Rv0320 (family_assigned) — hypothetical protein Rv0320 Rv2712c (dark) — DUF4192 domain-containing protein Rv2712c Rv1728c (requalified) — glycoside hydrolase Rv1728c ponA2 (requalified) — bifunctional penicillin-insensitive transglycosyla ponA2 rplC (requalified) — 50S ribosomal protein L3 rplC rplN (requalified) — 50S ribosomal protein L14 rplN rplF (requalified) — 50S ribosomal protein L6 rplF rplR (requalified) — 50S ribosomal protein L18 rplR rplB (requalified) — 50S ribosomal protein L2 rplB rplP (requalified) — 50S ribosomal protein L16 rplP vapC31 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC31 vapC25 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC25 PE_PGRS10 (family_assigned) — PE-PGRS family protein PE_PGRS10 PE_PGRS10 vapC48 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC48 vapC33 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC33 vapC37 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC37 vapC43 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC43 mpt83 (requalified) — cell surface glycolipoprotein Mpt83 mpt83 dxr (requalified) — 1-deoxy-D-xylulose-5-phosphate reductoisomerase dxr rip (requalified) — zinc metalloprotease Rip rip vapC29 (requalified) — type II toxin-antitoxin system ribonuclease VapC29 vapC29 Rv0616c (dark) — Hypothetical protein Rv0616c galTb (family_assigned) — Probable galactose-1-phosphate uridylyltransferase galTb galTa (family_assigned) — Probable galactose-1-phosphate uridylyltransferase galTa galK (requalified) — galactokinase galK Rv3180c (family_assigned) — type II toxin-antitoxin system VapC family toxin Rv3180c Rv2308 (family_assigned) — DUF433 domain-containing protein Rv2308 PPE8 (family_assigned) — PPE family protein PPE8 PPE8 PE_PGRS43 (family_assigned) — PE-PGRS family protein PE_PGRS43 PE_PGRS43 PE_PGRS28 (family_assigned) — PE-PGRS family protein PE_PGRS28 PE_PGRS28

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.