MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2862A · 44 genes shown · anchor vapC23 · open gene page → · ← back to 1 hop

Evidence: Min score 0
vapB23 (requalified) — antitoxin VapB23 vapB23 vapC23 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC23 Rv2862c (family_assigned) — DUF1707 domain-containing protein Rv2862c mapB (requalified) — methionine aminopeptidase mapB vapB28 (family_assigned) — type II toxin-antitoxin system VapB family antitox vapB28 vapB30 (requalified) — type II toxin-antitoxin system antitoxin VapB30 vapB30 vapB44 (family_assigned) — CopG family transcriptional regulator vapB44 vapB34 (family_assigned) — type II toxin-antitoxin system VapB family antitox vapB34 Rv2018 (family_assigned) — DUF433 domain-containing protein Rv2018 vapB41 (requalified) — antitoxin VapB41 vapB41 vapB19 (family_assigned) — CopG family transcriptional regulator vapB19 Rv2017 (family_assigned) — ImmA/IrrE family metallo-endopeptidase Rv2017 Rv2021c (family_assigned) — XRE family transcriptional regulator Rv2021c vapB31 (family_assigned) — ribbon-helix-helix protein%2C CopG family vapB31 vapB43 (family_assigned) — ribbon-helix-helix domain-containing protein vapB43 vapB29 (requalified) — antitoxin VapB29 vapB29 Rv0320 (family_assigned) — hypothetical protein Rv0320 Rv2712c (dark) — DUF4192 domain-containing protein Rv2712c Rv1728c (requalified) — glycoside hydrolase Rv1728c ponA2 (requalified) — bifunctional penicillin-insensitive transglycosyla ponA2 rplC (requalified) — 50S ribosomal protein L3 rplC rplN (requalified) — 50S ribosomal protein L14 rplN rplF (requalified) — 50S ribosomal protein L6 rplF rplR (requalified) — 50S ribosomal protein L18 rplR rplB (requalified) — 50S ribosomal protein L2 rplB rplP (requalified) — 50S ribosomal protein L16 rplP vapC28 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC28 Rv0609A (dark) — hypothetical protein Rv0609A Rv0607 (dark) — hypothetical protein Rv0607 Rv0605 (family_assigned) — IS607-like element IS1536 family transposase Rv0605 vapC30 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC30 vapC42 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC42 vapC36 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC36 vapC34 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC34 Rv0622 (dark) — DUF732 domain-containing protein Rv0622 vapC44 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC44 moaX (requalified) — MoaD-MoaE fusion protein MoaX moaX Rv3322c (requalified) — methyltransferase Rv3322c moaC3 (requalified) — cyclic pyranopterin monophosphate synthase MoaC moaC3 vapC38 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC38 lrpA (family_assigned) — transcriptional regulator LrpA lrpA Rv1742 (family_assigned) — hypothetical protein Rv1742 Rv0273c (family_assigned) — TetR/AcrR family transcriptional regulator Rv0273c Rv2019 (family_assigned) — hypothetical protein Rv2019

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.