MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2856 · 45 genes shown · anchor mtr · open gene page → · ← back to 1 hop

Evidence: Min score 0
nicT (family_assigned) — HoxN/HupN/NixA family nickel/cobalt transporter nicT mtr (requalified) — mycothione reductase mtr Rv2854 (family_assigned) — alpha/beta hydrolase Rv2854 plcC (requalified) — phospholipase C plcC nanT (family_assigned) — sialate:H+ symport family MFS transporter nanT plcA (requalified) — membrane-associated phospholipase A plcA plcB (requalified) — membrane-associated phospholipase B plcB sapM (requalified) — phosphatidylinositol-3-phosphatase sapM PE_PGRS48 (family_assigned) — PE-PGRS family protein PE_PGRS48 PE_PGRS48 Rv1762c (family_assigned) — heavy metal-binding domain-containing protein Rv1762c Rv2059 (family_assigned) — hypothetical protein Rv2059 Rv2025c (family_assigned) — cation diffusion facilitator family transporter Rv2025c Rv1248c (family_assigned) — multifunctional oxoglutarate decarboxylase/oxoglut Rv1248c bkdB (family_assigned) — 3-methyl-2-oxobutanoate dehydrogenase subunit beta bkdB bkdC (family_assigned) — dihydrolipoamide acetyltransferase family protein bkdC dlaT (requalified) — 2-oxoglutarate dehydrogenase%2C E2 component%2C di dlaT Rv1734c (family_assigned) — hypothetical protein Rv1734c nuoF (family_assigned) — NADH-quinone oxidoreductase subunit NuoF nuoF nuoG (family_assigned) — NADH-quinone oxidoreductase subunit G nuoG nuoD (family_assigned) — NADH dehydrogenase (quinone) subunit D nuoD nuoE (family_assigned) — NADH-quinone oxidoreductase subunit NuoE nuoE nuoI (family_assigned) — NADH-quinone oxidoreductase subunit NuoI nuoI impA (family_assigned) — inositol monophosphatase family protein impA Rv2252 (requalified) — diacylglycerol kinase Rv2252 Rv1903 (family_assigned) — phage holin family protein Rv1903 Rv1191 (family_assigned) — alpha/beta hydrolase Rv1191 lipJ (family_assigned) — adenylate/guanylate cyclase domain-containing prot lipJ Rv1672c (requalified) — MFS transporter Rv1672c trxB2 (requalified) — thioredoxin-disulfide reductase trxB2 suhB (requalified) — inositol-1-monophosphatase SuhB suhB pgsA2 (family_assigned) — CDP-alcohol phosphatidyltransferase family protein pgsA2 upp (requalified) — uracil phosphoribosyltransferase upp Rv3311 (family_assigned) — primosomal protein Rv3311 Rv2082 (dark) — DUF5631 domain-containing protein Rv2082 PPE54 (family_assigned) — PPE family protein PPE54 PPE54 PPE34 (family_assigned) — PPE family protein PPE34 PPE34 PPE40 (family_assigned) — PPE family protein PPE40 PPE40 PPE24 (family_assigned) — PPE family protein PPE24 PPE24 PPE55 (family_assigned) — PPE family protein PPE55 PPE55 Rv1761c (family_assigned) — DUF5073 family protein Rv1761c Rv1775 (family_assigned) — hypothetical protein Rv1775 gltB (family_assigned) — glutamate synthase large subunit gltB Rv2113 (family_assigned) — integral membrane protein Rv2113 cpnT (requalified) — outer membrane channel protein/necrotizing toxin g cpnT ptrp (family_assigned) — hypothetical protein ptrp

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.