MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2852c · 37 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
mqo (requalified) — malate dehydrogenase (quinone) mqo prpC (requalified) — 2-methylcitrate synthase prpC gltA2 (requalified) — citrate synthase gltA2 citA (requalified) — citrate synthase 2 citA mdh (requalified) — malate dehydrogenase mdh pca (requalified) — pyruvate carboxylase pca fum (requalified) — class II fumarate hydratase fum mez (requalified) — NAD-dependent malic enzyme mez glcB (requalified) — malate synthase G glcB pckA (requalified) — phosphoenolpyruvate carboxykinase (GTP) pckA gltB (family_assigned) — glutamate synthase large subunit gltB gabD1 (requalified) — succinate-semialdehyde dehydrogenase gabD1 gabD2 (requalified) — succinic semialdehyde dehydrogenase gabD2 prpD (requalified) — 2-methylcitrate dehydratase prpD acn (requalified) — iron-regulated aconitate hydratase Acn acn acs (requalified) — acetate--CoA ligase acs bkdC (family_assigned) — dihydrolipoamide acetyltransferase family protein bkdC Rv1248c (family_assigned) — multifunctional oxoglutarate decarboxylase/oxoglut Rv1248c pykA (requalified) — pyruvate kinase pykA sdhA (family_assigned) — succinate dehydrogenase flavoprotein subunit sdhA frdA (family_assigned) — fumarate reductase (quinol) flavoprotein subunit frdA Rv0248c (family_assigned) — fumarate reductase/succinate dehydrogenase flavopr Rv0248c Rv0247c (family_assigned) — succinate dehydrogenase/fumarate reductase iron-su Rv0247c sdhB (family_assigned) — succinate dehydrogenase iron-sulfur subunit sdhB bkdB (family_assigned) — 3-methyl-2-oxobutanoate dehydrogenase subunit beta bkdB icl1 (requalified) — isocitrate lyase icl1 aceAa (requalified) — isocitrate lyase AceAa aceAa aceAb (requalified) — isocitrate lyase AceAb aceAb pta (requalified) — phosphate acetyltransferase pta Rv2455c (family_assigned) — 2-oxoacid:acceptor oxidoreductase subunit alpha Rv2455c gltD (family_assigned) — glutamate synthase subunit beta gltD fprA (requalified) — ferredoxin--NADP(+) reductase FprA fprA fadH (requalified) — NADPH-dependent 2%2C4-dienoyl-CoA reductase fadH fprB (requalified) — FAD-dependent oxidoreductase fprB carB (family_assigned) — carbamoyl-phosphate synthase large subunit carB glnA1 (requalified) — type I glutamate--ammonia ligase glnA1 gabT (requalified) — 4-aminobutyrate--2-oxoglutarate transaminase gabT

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.