MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2842c · 46 genes shown · anchor nusA · open gene page → · ← back to 1 hop

Evidence: Min score 0
rimP (requalified) — ribosome maturation factor RimP rimP nusA (requalified) — transcription termination factor NusA nusA rpsL (requalified) — 30S ribosomal protein S12 rpsL Rv2840c (family_assigned) — hypothetical protein Rv2840c infB (requalified) — translation initiation factor IF-2 infB rbfA (requalified) — 30S ribosome-binding factor RbfA rbfA rpsJ (requalified) — 30S ribosomal protein S10 rpsJ rpsP (requalified) — 30S ribosomal protein S16 rpsP rplM (requalified) — 50S ribosomal protein L13 rplM rpsB (requalified) — 30S ribosomal protein S2 rpsB Rv2844 (family_assigned) — ferritin-like domain-containing protein Rv2844 Rv2843 (family_assigned) — hypothetical protein Rv2843 rpsF (requalified) — 30S ribosomal protein S6 rpsF rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB rpoC (family_assigned) — DNA-directed RNA polymerase subunit beta' rpoC rplK (requalified) — 50S ribosomal protein L11 rplK rpsG (requalified) — 30S ribosomal protein S7 rpsG rpsN1 (requalified) — 30S ribosomal protein S14 rpsN1 rplT (requalified) — 50S ribosomal protein L20 rplT rpsI (requalified) — 30S ribosomal protein S9 rpsI rplV (requalified) — 50S ribosomal protein L22 rplV rpsK (requalified) — 30S ribosomal protein S11 rpsK dinF (family_assigned) — MATE family efflux transporter dinF nrnA (requalified) — bifunctional oligoribonuclease/PAP phosphatase Nrn nrnA rplB (requalified) — 50S ribosomal protein L2 rplB rplO (requalified) — 50S ribosomal protein L15 rplO rpsE (requalified) — 30S ribosomal protein S5 rpsE truB (requalified) — tRNA pseudouridine(55) synthase TruB truB rplC (requalified) — 50S ribosomal protein L3 rplC rpmI (requalified) — 50S ribosomal protein L35 rpmI rpsM (requalified) — 30S ribosomal protein S13 rpsM rplN (requalified) — 50S ribosomal protein L14 rplN rpmC (requalified) — 50S ribosomal protein L29 rpmC rpmG2 (requalified) — 50S ribosomal protein L33 rpmG2 rplY (requalified) — 50S ribosomal protein L25/general stress protein C rplY rpmE (requalified) — 50S ribosomal protein L31 rpmE rpmA (requalified) — 50S ribosomal protein L27 rpmA rplR (requalified) — 50S ribosomal protein L18 rplR rplQ (requalified) — 50S ribosomal protein L17 rplQ rpsR2 (requalified) — 30S ribosomal protein S18 rpsR2 rpsH (requalified) — 30S ribosomal protein S8 rpsH rpsC (requalified) — 30S ribosomal protein S3 rpsC Rv3118 (family_assigned) — hypothetical protein Rv3118 Rv0814c (family_assigned) — DUF1416 domain-containing protein Rv0814c Rv3605c (family_assigned) — DUF3180 domain-containing protein Rv3605c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.