MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2841c · 46 genes shown · anchor rimP · open gene page → · ← back to 1 hop

Evidence: Min score 0
nusA (requalified) — transcription termination factor NusA nusA rimP (requalified) — ribosome maturation factor RimP rimP rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB rpoC (family_assigned) — DNA-directed RNA polymerase subunit beta' rpoC rplK (requalified) — 50S ribosomal protein L11 rplK rpsG (requalified) — 30S ribosomal protein S7 rpsG rpsJ (requalified) — 30S ribosomal protein S10 rpsJ Rv2840c (family_assigned) — hypothetical protein Rv2840c nusG (requalified) — transcription termination/antitermination protein nusG rpsD (requalified) — 30S ribosomal protein S4 rpsD rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ infB (requalified) — translation initiation factor IF-2 infB rpsL (requalified) — 30S ribosomal protein S12 rpsL rbfA (requalified) — 30S ribosome-binding factor RbfA rbfA sigA (requalified) — RNA polymerase sigma factor sigA rpsM (requalified) — 30S ribosomal protein S13 rpsM rpsH (requalified) — 30S ribosomal protein S8 rpsH sigB (family_assigned) — sigma-70 family RNA polymerase sigma factor SigB sigB sigL (family_assigned) — sigma-70 family RNA polymerase sigma factor SigL sigL whiB7 (family_assigned) — transcriptional regulator WhiB7 whiB7 rplR (requalified) — 50S ribosomal protein L18 rplR rplJ (requalified) — 50S ribosomal protein L10 rplJ rplY (requalified) — 50S ribosomal protein L25/general stress protein C rplY rpsF (requalified) — 30S ribosomal protein S6 rpsF Rv0500B (family_assigned) — Conserved hypothetical protein Rv0500B rplA (requalified) — 50S ribosomal protein L1 rplA rpmD (requalified) — 50S ribosomal protein L30 rpmD rplI (requalified) — 50S ribosomal protein L9 rplI rplU (requalified) — 50S ribosomal protein L21 rplU rpsC (requalified) — 30S ribosomal protein S3 rpsC rplQ (requalified) — 50S ribosomal protein L17 rplQ rplD (requalified) — 50S ribosomal protein L4 rplD rpsP (requalified) — 30S ribosomal protein S16 rpsP rplC (requalified) — 50S ribosomal protein L3 rplC rpmI (requalified) — 50S ribosomal protein L35 rpmI rplN (requalified) — 50S ribosomal protein L14 rplN rpmC (requalified) — 50S ribosomal protein L29 rpmC dinF (family_assigned) — MATE family efflux transporter dinF nrnA (requalified) — bifunctional oligoribonuclease/PAP phosphatase Nrn nrnA secE1 (requalified) — preprotein translocase SecE secE1 rbpA (family_assigned) — RNA polymerase-binding protein RbpA rbpA helZ (requalified) — DEAD/DEAH box helicase helZ rpsB (requalified) — 30S ribosomal protein S2 rpsB rplB (requalified) — 50S ribosomal protein L2 rplB rplO (requalified) — 50S ribosomal protein L15 rplO

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.