MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2833c · 27 genes shown · anchor ugpE · open gene page → · ← back to 1 hop

Evidence: Min score 0
ugpB (family_assigned) — ABC transporter substrate-binding protein ugpB ugpE (family_assigned) — carbohydrate ABC transporter permease ugpE ugpA (family_assigned) — sugar ABC transporter permease ugpA ugpC (family_assigned) — ABC transporter ATP-binding protein ugpC sugB (family_assigned) — trehalose ABC transporter permease SugB sugB sugA (family_assigned) — trehalose ABC transporter permease SugA sugA uspB (family_assigned) — sugar ABC transporter permease UspB uspB Rv2039c (family_assigned) — carbohydrate ABC transporter permease Rv2039c uspA (family_assigned) — sugar ABC transporter permease uspA Rv2040c (family_assigned) — sugar ABC transporter permease Rv2040c ugpC (family_assigned) — sn-glycerol-3-phosphate ABC transporter ATP-bindin ugpC rbfA (requalified) — 30S ribosome-binding factor RbfA rbfA infB (requalified) — translation initiation factor IF-2 infB sugC (family_assigned) — trehalose ABC transporter ATP-binding protein SugC sugC lpqY (family_assigned) — trehalose ABC transporter substrate-binding protei lpqY Rv2041c (family_assigned) — sugar ABC transporter substrate-binding protein Rv2041c uspC (family_assigned) — sugar ABC transporter substrate-binding protein uspC nrnA (requalified) — bifunctional oligoribonuclease/PAP phosphatase Nrn nrnA dinF (family_assigned) — MATE family efflux transporter dinF truB (requalified) — tRNA pseudouridine(55) synthase TruB truB Rv2840c (family_assigned) — hypothetical protein Rv2840c rpsK (requalified) — 30S ribosomal protein S11 rpsK rpsB (requalified) — 30S ribosomal protein S2 rpsB rplB (requalified) — 50S ribosomal protein L2 rplB rplO (requalified) — 50S ribosomal protein L15 rplO rpsG (requalified) — 30S ribosomal protein S7 rpsG rpsE (requalified) — 30S ribosomal protein S5 rpsE

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.