MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2830c · 46 genes shown · anchor vapC22 · open gene page → · ← back to 1 hop

Evidence: Min score 0
vapB22 (family_assigned) — type II toxin-antitoxin system prevent-host-death vapB22 vapC22 (family_assigned) — PIN domain-containing protein vapC22 Rv2828A (dark) — hypothetical protein Rv2828A Rv2828c (family_assigned) — DUF1802 family protein Rv2828c echA16 (requalified) — enoyl-CoA hydratase echA16 Rv2826c (family_assigned) — nucleotidyl transferase AbiEii/AbiGii toxin family Rv2826c Rv2827c (family_assigned) — type IV toxin-antitoxin system AbiEi family antito Rv2827c vapC10 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC10 vapB41 (requalified) — antitoxin VapB41 vapB41 Rv1638A (family_assigned) — hypothetical protein Rv1638A mazF7 (requalified) — mRNA interferase MazF7 mazF7 Rv2017 (family_assigned) — ImmA/IrrE family metallo-endopeptidase Rv2017 vapB9 (requalified) — antitoxin VapB9 vapB9 ligC (requalified) — ATP-dependent DNA ligase ligC Rv1156 (requalified) — HhH-GPD-type base excision DNA repair protein Rv1156 Rv2825c (dark) — hypothetical protein Rv2825c Rv3779 (family_assigned) — DUF6541 family protein Rv3779 fadB2 (requalified) — 3-hydroxybutyryl-CoA dehydrogenase FadB2 fadB2 fadB3 (requalified) — 3-hydroxybutyryl-CoA dehydrogenase FadB fadB3 fadE7 (requalified) — acyl-CoA dehydrogenase fadE7 fadE4 (family_assigned) — acyl-CoA dehydrogenase family protein fadE4 fadE1 (requalified) — acyl-CoA dehydrogenase FadE1 fadE1 fadE2 (requalified) — acyl-CoA dehydrogenase fadE2 Rv3183 (family_assigned) — XRE family transcriptional regulator Rv3183 Rv3060c (family_assigned) — FCD domain-containing protein Rv3060c vapB10 (family_assigned) — CopG family transcriptional regulator vapB10 nlhH (family_assigned) — alpha/beta hydrolase nlhH lipI (family_assigned) — alpha/beta hydrolase lipI Rv0611c (family_assigned) — DUF4926 domain-containing protein Rv0611c vapC20 (requalified) — type II toxin-antitoxin system toxin 23S rRNA-spec vapC20 PE_PGRS25 (family_assigned) — PE-PGRS family protein PE_PGRS25 PE_PGRS25 vapC41 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC41 Rv2600 (family_assigned) — integral membrane protein Rv2600 speE (requalified) — spermidine synthase speE vapC17 (family_assigned) — PIN domain-containing protein vapC17 Rv0229c (family_assigned) — PIN domain nuclease Rv0229c vapC15 (family_assigned) — PIN domain nuclease vapC15 Rv1639c (family_assigned) — alpha/beta hydrolase family protein Rv1639c Rv2468c (requalified) — hypothetical protein Rv2468c Rv3205c (family_assigned) — hypothetical protein Rv3205c Rv2474c (family_assigned) — hypothetical protein Rv2474c Rv1083 (dark) — hypothetical protein Rv1083 cei (requalified) — envelope integrity protein Cei cei mazE7 (requalified) — antitoxin MazE7 mazE7 mazE9 (requalified) — antitoxin MazE9 mazE9 cobG (requalified) — precorrin-3B synthase cobG

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.