MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2826c · 43 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv2826c (family_assigned) — nucleotidyl transferase AbiEii/AbiGii toxin family Rv2826c Rv2827c (family_assigned) — type IV toxin-antitoxin system AbiEi family antito Rv2827c Rv2825c (dark) — hypothetical protein Rv2825c Rv2828c (family_assigned) — DUF1802 family protein Rv2828c Rv2828A (dark) — hypothetical protein Rv2828A vapC22 (family_assigned) — PIN domain-containing protein vapC22 vapB22 (family_assigned) — type II toxin-antitoxin system prevent-host-death vapB22 Rv1044 (family_assigned) — type IV toxin-antitoxin system AbiEi family antito Rv1044 Rv1045 (family_assigned) — nucleotidyl transferase AbiEii/AbiGii toxin family Rv1045 Rv0837c (family_assigned) — type IV toxin-antitoxin system AbiEi family antito Rv0837c Rv0836c (family_assigned) — hypothetical protein Rv0836c Rv0078A (family_assigned) — hypothetical protein Rv0078A Rv1545 (dark) — hypothetical protein Rv1545 Rv3183 (family_assigned) — XRE family transcriptional regulator Rv3183 Rv3060c (family_assigned) — FCD domain-containing protein Rv3060c Rv3779 (family_assigned) — DUF6541 family protein Rv3779 Rv0048c (family_assigned) — DUF1707 domain-containing protein Rv0048c Rv0517 (requalified) — acyltransferase Rv0517 Rv0875c (dark) — DUF2771 domain-containing protein Rv0875c echA16 (requalified) — enoyl-CoA hydratase echA16 ligC (requalified) — ATP-dependent DNA ligase ligC Rv1156 (requalified) — HhH-GPD-type base excision DNA repair protein Rv1156 Rv3190c (dark) — hypothetical protein Rv3190c Rv1043c (requalified) — serine protease Rv1043c Rv2209 (requalified) — MFS transporter Rv2209 PPE8 (family_assigned) — PPE family protein PPE8 PPE8 PPE56 (family_assigned) — PPE family protein PPE56 PPE56 PPE55 (family_assigned) — PPE family protein PPE55 PPE55 PE_PGRS28 (family_assigned) — PE-PGRS family protein PE_PGRS28 PE_PGRS28 PE_PGRS43 (family_assigned) — PE-PGRS family protein PE_PGRS43 PE_PGRS43 Rv1004c (family_assigned) — hypothetical protein Rv1004c Rv0078B (family_assigned) — hypothetical protein Rv0078B Rv0080 (family_assigned) — pyridoxamine 5'-phosphate oxidase family protein Rv0080 Rv0079 (requalified) — dormancy-associated translation inhibitor Rv0079 fic (family_assigned) — Fic/DOC family protein fic Rv0569 (family_assigned) — DUF1918 domain-containing protein Rv0569 Rv2514c (family_assigned) — DUF4411 family protein Rv2514c Rv1544 (family_assigned) — SDR family oxidoreductase Rv1544 Rv1543 (family_assigned) — SDR family NAD(P)-dependent oxidoreductase Rv1543 Rv1546 (family_assigned) — SRPBCC family protein Rv1546 dnaE1 (family_assigned) — DNA polymerase III subunit alpha dnaE1 glbN (requalified) — group 1 truncated hemoglobin GlbN glbN darT (requalified) — toxin-antitoxin system toxin DarT darT

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.